Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15f02r
         (955 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   1.3  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   7.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   9.4  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 300 NYVEKNKYDNIVVLDHSFA 356
           NY E+NK D IV+L  +++
Sbjct: 284 NYAEENKRDEIVLLTEAYS 302


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 812 GSHTSSLNAVLLDLTSNNSYHNSLKYCAINI 720
           G HT     V    T +N  +N L+  AIN+
Sbjct: 68  GIHTGESIVVAPSQTLSNKEYNMLRTTAINV 98


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 944 WAXKIREISKIIDESPSVVNITNNTLLYI*TYDNQDVII 828
           W   I    ++ D +    NITN+T L    Y     II
Sbjct: 97  WTNNIFPKGELFDATVFTYNITNSTPLLKKLYGGNSTII 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,179
Number of Sequences: 438
Number of extensions: 4975
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31323201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)