Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15e20f
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.5  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   4.4  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.4  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   7.7  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 12  VAGIPFLSFYDVSGQLSYQEEKLFNAVE 95
           VAGI F+S Y      +++ E+L  A+E
Sbjct: 145 VAGITFISVYAPPSLSAHEFERLLGAIE 172


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 331 GYT-ADITSSNSCAVIWSLFLLY 266
           GY  +D+TS NSC  +W +   Y
Sbjct: 207 GYVGSDMTSRNSCTQLWLITHYY 229


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 12  VAGIPFLSFYDVSGQLSYQE-EKLFNAVE 95
           VAGI F+S Y     LS QE E+L  AVE
Sbjct: 82  VAGIDFISVY-APPSLSPQEYERLLEAVE 109


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 218 TSVLTRKNIHNNFMCRN 168
           T++LT  N   N+MCR+
Sbjct: 538 TTILTSVNSSGNYMCRS 554


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,354
Number of Sequences: 2352
Number of extensions: 14401
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)