Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15e05r
         (960 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    50   3e-08
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   4.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.2  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   9.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   9.5  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 50.0 bits (114), Expect = 3e-08
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 7/165 (4%)
 Frame = -2

Query: 914 SLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK--THGA 741
           +LG  D L+NNA + +     +    ++ K FD+N+  +  + Q V  K+++ K   +G 
Sbjct: 81  NLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVL-KLMKKKGINNGI 139

Query: 740 IVNISSQASKAAL---KDHTIYSASKAALDALTRAMALELG--PYGIRVNAINPTVIMTE 576
           IVNI+  +    L   ++   Y ASK AL  LT  +  EL      I+V +I+P ++ T+
Sbjct: 140 IVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETD 199

Query: 575 MAKVGWSDPIKANEMLSKIPLGRFGEISEVVNAVVFLLSERSSMI 441
           M    W   +K N  L+  P        +V N V+F L    +++
Sbjct: 200 MT-AQW---LKENSRLALKP-------KDVSNCVLFALQTPDNVL 233


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 290 ILTMFFFALSLTVIIFQNIL 349
           I TM FF L +T+II   IL
Sbjct: 224 ISTMLFFVLPMTIIIVLYIL 243


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 396 LCSEETTIYGQFYTINHTRSFTQEENHRIYY 488
           + ++    YG  Y  NHT S  + +    YY
Sbjct: 1   MANQTANYYGDVYQWNHTVSSGERDTRTEYY 31


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 124 TYLKYKNRAIMCNVCSYFNSDFR 56
           T+L Y N A    + S FN++FR
Sbjct: 311 TWLGYSNSAFNPIIYSIFNTEFR 333


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 487 TSDISPNLPSGILESISLAFIGSDQPT 567
           +S  SP+ PS    S+S   +GS+  T
Sbjct: 88  SSSPSPSSPSSFFSSVSPTSLGSENYT 114


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 481 FTTSDISPNLPSGILESISLAFIGSDQPT 567
           F T+  SP    G+LE  S AF G+  PT
Sbjct: 911 FATAASSP----GLLERASPAFSGTSSPT 935


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +2

Query: 659 HPK---QLLKHCRWCGLSE 706
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +2

Query: 659 HPK---QLLKHCRWCGLSE 706
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,546
Number of Sequences: 438
Number of extensions: 4911
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)