Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15d24r
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protei... 360 4e-99
BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protei... 360 4e-99
BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protei... 360 4e-99
AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3 pr... 360 4e-99
X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein. 352 8e-97
M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein ... 352 8e-97
CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein. 352 8e-97
BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protei... 352 8e-97
BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein. 352 8e-97
BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protei... 352 8e-97
AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protei... 352 8e-97
M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID ... 350 3e-96
BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protei... 349 5e-96
AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protei... 176 9e-44
BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein. 142 1e-33
BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein. 142 1e-33
AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein. 142 1e-33
AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding protei... 142 1e-33
AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein. 142 1e-33
AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein. 142 1e-33
AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein. 134 4e-31
AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protei... 107 6e-23
AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein. 104 4e-22
AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein. 78 3e-14
BC053665-1|AAH53665.1| 171|Homo sapiens TTC9C protein protein. 32 2.9
BC032123-1|AAH32123.1| 171|Homo sapiens tetratricopeptide repea... 32 2.9
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 31 3.8
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 31 3.8
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 31 3.8
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 31 3.8
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 31 3.8
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 31 3.8
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 31 3.8
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 31 3.8
BC112927-1|AAI12928.1| 458|Homo sapiens SRGAP2P1 protein protein. 31 6.7
BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing ad... 30 8.8
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 8.8
AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing ad... 30 8.8
AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing ad... 30 8.8
AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing ad... 30 8.8
AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing ad... 30 8.8
AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing ad... 30 8.8
AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing ad... 30 8.8
AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing ad... 30 8.8
AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing ad... 30 8.8
AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens ... 30 8.8
AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein. 30 8.8
>DQ448593-1|ABD93323.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 360 bits (885), Expect = 4e-99
Identities = 175/197 (88%), Positives = 184/197 (93%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 474 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 295
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF A+FLDFKIQNMVG
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVG 297
Query: 294 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREE 115
SCDV+FPIRLEGLVLTH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAK R E
Sbjct: 298 SCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSE 357
Query: 114 IYEAFDNIYPILKSFKK 64
IYEAF+NIYPILK FKK
Sbjct: 358 IYEAFENIYPILKGFKK 374
>BC117185-1|AAI17186.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 360 bits (885), Expect = 4e-99
Identities = 175/197 (88%), Positives = 184/197 (93%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 474 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 295
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF A+FLDFKIQNMVG
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVG 297
Query: 294 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREE 115
SCDV+FPIRLEGLVLTH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAK R E
Sbjct: 298 SCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSE 357
Query: 114 IYEAFDNIYPILKSFKK 64
IYEAF+NIYPILK FKK
Sbjct: 358 IYEAFENIYPILKGFKK 374
>BC117159-1|AAI17160.1| 375|Homo sapiens TATA box binding protein
like 2 protein.
Length = 375
Score = 360 bits (885), Expect = 4e-99
Identities = 175/197 (88%), Positives = 184/197 (93%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 474 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 295
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF A+FLDFKIQNMVG
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVG 297
Query: 294 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREE 115
SCDV+FPIRLEGLVLTH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAK R E
Sbjct: 298 SCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSE 357
Query: 114 IYEAFDNIYPILKSFKK 64
IYEAF+NIYPILK FKK
Sbjct: 358 IYEAFENIYPILKGFKK 374
>AY457923-1|AAR24281.1| 375|Homo sapiens TBP-related factor 3
protein.
Length = 375
Score = 360 bits (885), Expect = 4e-99
Identities = 175/197 (88%), Positives = 184/197 (93%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
LS AS PMTP+TP+S GI+PQLQNIVSTVNL CKLDLKKIALHA+NAEYNPKRFAAV
Sbjct: 178 LSLASITPMTPMTPISECCGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYNPKRFAAV 237
Query: 474 IMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVG 295
IMRIREPRTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF A+FLDFKIQNMVG
Sbjct: 238 IMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDFKIQNMVG 297
Query: 294 SCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREE 115
SCDV+FPIRLEGLVLTH QFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAK R E
Sbjct: 298 SCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSE 357
Query: 114 IYEAFDNIYPILKSFKK 64
IYEAF+NIYPILK FKK
Sbjct: 358 IYEAFENIYPILKGFKK 374
>X54993-1|CAA38736.1| 335|Homo sapiens TFIID protein.
Length = 335
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 144 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 203
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 204 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 263
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 264 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 323
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 324 IYPILKGFRK 333
>M55654-1|AAA36731.1| 339|Homo sapiens TATA-box binding protein
protein.
Length = 339
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 267
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 268 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 327
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 328 IYPILKGFRK 337
>CR456776-1|CAG33057.1| 339|Homo sapiens TBP protein.
Length = 339
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 267
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 268 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 327
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 328 IYPILKGFRK 337
>BC110341-1|AAI10342.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 207 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 266
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 267 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 326
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 327 IYPILKGFRK 336
>BC109054-1|AAI09055.1| 288|Homo sapiens TBP protein protein.
Length = 288
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 97 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 156
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 157 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 216
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 217 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 276
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 277 IYPILKGFRK 286
>BC109053-1|AAI09054.1| 338|Homo sapiens TATA box binding protein
protein.
Length = 338
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 147 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 206
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 207 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 266
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 267 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 326
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 327 IYPILKGFRK 336
>AL031259-5|CAA20286.1| 339|Homo sapiens TATA box binding protein
protein.
Length = 339
Score = 352 bits (866), Expect = 8e-97
Identities = 170/190 (89%), Positives = 177/190 (93%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 267
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 268 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 327
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 328 IYPILKGFRK 337
>M34960-1|AAC03409.1| 339|Homo sapiens transcription factor IID
protein.
Length = 339
Score = 350 bits (861), Expect = 3e-96
Identities = 169/190 (88%), Positives = 176/190 (92%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL RNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRRRNAEYNPKRFAAVIMRIREP 207
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 208 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 267
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEGLVLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 268 IRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 327
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 328 IYPILKGFRK 337
>BT019657-1|AAV38463.1| 336|Homo sapiens TATA box binding protein
protein.
Length = 336
Score = 349 bits (859), Expect = 5e-96
Identities = 169/190 (88%), Positives = 176/190 (92%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 145 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 204
Query: 453 RTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFP 274
RTTALIFSSGKMVCTGAKSEE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFP
Sbjct: 205 RTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFP 264
Query: 273 IRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDN 94
IRLEG VLTH QFSSYEPELFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+N
Sbjct: 265 IRLEGPVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFEN 324
Query: 93 IYPILKSFKK 64
IYPILK F+K
Sbjct: 325 IYPILKGFRK 334
>AL031259-4|CAD92542.1| 100|Homo sapiens TATA box binding protein
protein.
Length = 100
Score = 176 bits (428), Expect = 9e-44
Identities = 89/111 (80%), Positives = 94/111 (84%)
Frame = -2
Query: 396 EEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPE 217
EE SRLAARKYAR++QKLGF AKFLDFKIQNMVGSCDVKFPI SYEPE
Sbjct: 1 EEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPI-------------SYEPE 47
Query: 216 LFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKK 64
LFPGLIYRM+KPRIVLLIFVSGKVVLTGAKVR EIYEAF+NIYPILK F+K
Sbjct: 48 LFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 98
Score = 39.1 bits (87), Expect = 0.019
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -2
Query: 501 YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAK 400
Y P+ F +I R+ +PR LIF SGK+V TGAK
Sbjct: 44 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAK 77
>BC017559-1|AAH17559.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 71/174 (40%), Positives = 106/174 (60%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
PEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>BC000381-1|AAH00381.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAA-VIMRIREPRTTALIFSSGKMVCTG 406
+ N+V C L+L+KIAL N Y KR A V+M++R+PR TA I+SSGK++CTG
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIY--KRDAGKVLMKLRKPRITATIWSSGKIICTG 70
Query: 405 AKSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSY 226
A SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SY
Sbjct: 71 ATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASY 130
Query: 225 EPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
EPEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 131 EPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>AL035699-1|CAB43704.1| 186|Homo sapiens TBP-like 1 protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 71/174 (40%), Positives = 106/174 (60%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
PEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>AF136570-1|AAD28785.1| 186|Homo sapiens TATA box binding
protein-related factor 2 protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 71/174 (40%), Positives = 106/174 (60%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
PEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>AF130312-1|AAD24800.1| 186|Homo sapiens STUD protein protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 71/174 (40%), Positives = 106/174 (60%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
PEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>AB020881-1|BAA75218.1| 186|Homo sapiens TBP-like protein protein.
Length = 186
Score = 142 bits (345), Expect = 1e-33
Identities = 71/174 (40%), Positives = 106/174 (60%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVREEIYEAFDNIYPILKSFKKQ 61
PEL P + YR+ R L IF +G + +TG V+ + A + IYP + +K+
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTGPNVK-AVATAVEQIYPFVFESRKE 184
>AL035699-2|CAD92515.1| 163|Homo sapiens TBP-like 1 protein.
Length = 163
Score = 134 bits (324), Expect = 4e-31
Identities = 65/150 (43%), Positives = 94/150 (62%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYE 223
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL + +SYE
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYE 131
Query: 222 PELFPGLIYRMVKPRIVLLIFVSGKVVLTG 133
PEL P + YR+ R L IF +G + +TG
Sbjct: 132 PELHPAVCYRIKSLRATLQIFSTGSITVTG 161
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -2
Query: 324 LDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKV 145
LD I N+V + + L + L G Y+ ++ L+ ++ KPRI I+ SGK+
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIAL-EGANVIYKRDVGKVLM-KLRKPRITATIWSSGKI 66
Query: 144 VLTGAKVREE 115
+ TGA EE
Sbjct: 67 ICTGATSEEE 76
>AL031259-6|CAD92543.1| 208|Homo sapiens TATA box binding protein
protein.
Length = 208
Score = 107 bits (256), Expect = 6e-23
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = -2
Query: 633 PMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREP 454
P+TP TP S GI+PQLQNIVSTVNL CKLDLK IAL ARNAEYNPKRFAAVIMRIREP
Sbjct: 148 PITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREP 207
Query: 453 R 451
R
Sbjct: 208 R 208
>AL035699-3|CAD92516.1| 128|Homo sapiens TBP-like 1 protein.
Length = 128
Score = 104 bits (249), Expect = 4e-22
Identities = 49/106 (46%), Positives = 71/106 (66%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKLGFTAKFLDFKIQNMVGSCDVKFPIRL 265
SEE+++ AR+ AR +QKLGF F DFK+ N++ C++ F IRL
Sbjct: 72 TSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRL 117
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -2
Query: 324 LDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKV 145
LD I N+V + + L + L G Y+ ++ L+ ++ KPRI I+ SGK+
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIAL-EGANVIYKRDVGKVLM-KLRKPRITATIWSSGKI 66
Query: 144 VLTGAKVREE 115
+ TGA EE
Sbjct: 67 ICTGATSEEE 76
>AL035699-4|CAD92517.1| 91|Homo sapiens TBP-like 1 protein.
Length = 91
Score = 78.2 bits (184), Expect = 3e-14
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = -2
Query: 582 LQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGA 403
+ N+V C L+L+KIAL N Y + V+M++R+PR TA I+SSGK++CTGA
Sbjct: 13 ITNVVCVFRTRCHLNLRKIALEGANVIYK-RDVGKVLMKLRKPRITATIWSSGKIICTGA 71
Query: 402 KSEEDSRLAARKYARIIQKL 343
SEE+++ AR+ AR +QKL
Sbjct: 72 TSEEEAKFGARRLARSLQKL 91
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -2
Query: 324 LDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKV 145
LD I N+V + + L + L G Y+ ++ L+ ++ KPRI I+ SGK+
Sbjct: 9 LDILITNVVCVFRTRCHLNLRKIAL-EGANVIYKRDVGKVLM-KLRKPRITATIWSSGKI 66
Query: 144 VLTGAKVREE 115
+ TGA EE
Sbjct: 67 ICTGATSEEE 76
>BC053665-1|AAH53665.1| 171|Homo sapiens TTC9C protein protein.
Length = 171
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
L + P+P+ L P P + P+ +NI+ T DC +L L Y R +
Sbjct: 41 LDPSLPSPLPNLGPQG--PALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQ 98
Query: 474 IMRIREPRTTALIFSSG 424
+ R+P ++ +G
Sbjct: 99 KVLERQPDNAKALYRAG 115
>BC032123-1|AAH32123.1| 171|Homo sapiens tetratricopeptide repeat
domain 9C protein.
Length = 171
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = -2
Query: 654 LSQASPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLKKIALHARNAEYNPKRFAAV 475
L + P+P+ L P P + P+ +NI+ T DC +L L Y R +
Sbjct: 41 LDPSLPSPLPNLGPQG--PALTPEQENILHTTQTDCYNNLAACLLQMEPVNYERVREYSQ 98
Query: 474 IMRIREPRTTALIFSSG 424
+ R+P ++ +G
Sbjct: 99 KVLERQPDNAKALYRAG 115
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Frame = -1
Query: 682 CRKSIKSTNAKPS*SCPNDSSDTTLCRPWNFTTVTKHSLYCKS*LQIRFEEDCITCS*C* 503
C K K T P +D C +FT H +C S + R E + S C
Sbjct: 59 CTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCT 118
Query: 502 V*SQTFCRC---NYENKGTEN--NSFNFLIW*NG 416
V T C C Y + +EN FN + NG
Sbjct: 119 VDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNG 152
>BC112927-1|AAI12928.1| 458|Homo sapiens SRGAP2P1 protein protein.
Length = 458
Score = 30.7 bits (66), Expect = 6.7
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Frame = -2
Query: 366 YARIIQKLG--FTAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYR 193
Y+R ++KL F AK K Q +V P+ L+L ++ S + +
Sbjct: 63 YSRNLEKLAEHFLAKTRSTKDQQFKKDQNVLSPVNCWNLLLNQVKWESRDHTTLSDIYLN 122
Query: 192 MVKPRIVLLIFVSGKVVL----TGAKVREEIYEAFDNIYPILKSF 70
+ PR V + SG++ G ++++++ + + +Y ++K++
Sbjct: 123 NIIPRFVQVSEDSGRLFKKSKEVGQQLQDDLMKVLNELYSVMKTY 167
>BC004258-1|AAH04258.2| 649|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 649
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQLQNIVSTVNLDCKLDLK 532
SPAP TP+TPL G P +++S+V L D++
Sbjct: 331 SPAPTTPVTPL----GTTPPSSDVISSVELPLDADVQ 363
>AL358234-3|CAH70768.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL358234-1|CAH70766.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-4|CAI40924.1| 602|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 602
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 198 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 238
>AL161936-2|CAI40922.1| 647|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 389
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 88 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 128
>AK223600-1|BAD97320.1| 647|Homo sapiens WW domain-containing
adapter with a coiled-coil region isoform 1 variant
protein.
Length = 647
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 346 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 386
>AK055852-1|BAB71029.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ31290 fis, clone KIDNE2007352, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 602
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 301 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 341
>AB058747-1|BAB47473.1| 367|Homo sapiens KIAA1844 protein protein.
Length = 367
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 642 SPAPMTPLTPLSADPGILPQ-LQNIVSTVNL-DCKLDLKKI 526
SP P +P+ PL DP +L Q L + +T+ L + +D+ KI
Sbjct: 278 SPVPQSPIPPLLQDPNLLRQLLPALQATLQLNNSNVDISKI 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,369,109
Number of Sequences: 237096
Number of extensions: 2364870
Number of successful extensions: 5524
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5471
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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