Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15d17r
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK022027-1|BAB13955.1|  234|Homo sapiens protein ( Homo sapiens ...   111   2e-24
AK001440-1|BAA91692.1|  234|Homo sapiens protein ( Homo sapiens ...   111   2e-24
AF346603-1|AAK29084.1|  476|Homo sapiens Sec61 alpha form 2 prot...   111   2e-24
AL831940-1|CAD38592.1|  215|Homo sapiens hypothetical protein pr...   109   9e-24
AK075148-1|BAC11434.1|  170|Homo sapiens protein ( Homo sapiens ...   109   9e-24
AK074928-1|BAC11298.1|  356|Homo sapiens protein ( Homo sapiens ...   109   9e-24
AK074907-1|BAC11283.1|  170|Homo sapiens protein ( Homo sapiens ...   109   9e-24
AF346602-1|AAK29083.1|  476|Homo sapiens Sec61 alpha form 1 prot...   109   9e-24
AF084458-1|AAD39847.1|  476|Homo sapiens sec61 homolog protein.       109   9e-24
AK096512-1|BAC04807.1|  123|Homo sapiens protein ( Homo sapiens ...    33   1.3  

>AK022027-1|BAB13955.1|  234|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11965 fis, clone HEMBB1001112, moderately
           similar to Homo sapiens sec61 homolog mRNA. ).
          Length = 234

 Score =  111 bits (268), Expect = 2e-24
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAE+GGM  L F
Sbjct: 177 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 234


>AK001440-1|BAA91692.1|  234|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10578 fis, clone NT2RP2003433, highly similar to
           PROTEIN TRANSPORT PROTEIN SEC61 ALPHA SUBUNIT. ).
          Length = 234

 Score =  111 bits (268), Expect = 2e-24
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAE+GGM  L F
Sbjct: 177 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 234


>AF346603-1|AAK29084.1|  476|Homo sapiens Sec61 alpha form 2
           protein.
          Length = 476

 Score =  111 bits (268), Expect = 2e-24
 Identities = 54/58 (93%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAE+GGM  L F
Sbjct: 419 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 476


>AL831940-1|CAD38592.1|  215|Homo sapiens hypothetical protein
           protein.
          Length = 215

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 158 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 215


>AK075148-1|BAC11434.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90667 fis, clone PLACE1005410, highly similar to
           Protein transport protein Sec61 alpha subunitisoform 1.
           ).
          Length = 170

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 113 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 170


>AK074928-1|BAC11298.1|  356|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90447 fis, clone NT2RP3001240, highly similar to
           Canis familiaris sec61 homologue mRNA. ).
          Length = 356

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 299 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 356


>AK074907-1|BAC11283.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90426 fis, clone NT2RP3000460, highly similar to
           Protein transport protein Sec61 alpha subunitisoform 1.
           ).
          Length = 170

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 113 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 170


>AF346602-1|AAK29083.1|  476|Homo sapiens Sec61 alpha form 1
           protein.
          Length = 476

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 419 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 476


>AF084458-1|AAD39847.1|  476|Homo sapiens sec61 homolog protein.
          Length = 476

 Score =  109 bits (263), Expect = 9e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = -1

Query: 851 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEMGGMSTLLF 678
           TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ+E+G M  LLF
Sbjct: 419 TAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF 476


>AK096512-1|BAC04807.1|  123|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39193 fis, clone OCBBF2004866. ).
          Length = 123

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 685 SVLMPPISACSLTKISKYW*MMVT----ASSIPVPEPMAPRKSASTDRAPMHSPPNA 843
           S+ +PP+ +    K+   W + +      S  P+P P+  ++S  + R  +H PP A
Sbjct: 16  SLCLPPLESGEAWKVPAAWVLQMAPAKATSHSPLPSPVTQQQSRGSSREALHVPPKA 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,761,151
Number of Sequences: 237096
Number of extensions: 2412565
Number of successful extensions: 5275
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5274
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)