Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15d16f
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    26   0.73 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.9  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   5.1  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 26.2 bits (55), Expect = 0.73
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 419 LKSLHAMNKVRIPLIRDGLIQTSERTL-TPLQDKKILDVGCGGG 547
           LK+   M ++R     D +I++ +  L T  ++KK+L VG GGG
Sbjct: 355 LKARSDMIRLRKKKALDEMIKSKQPPLVTSEEEKKLLTVGGGGG 398


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 338 HGRTTLDSSEIKMFSKQMSEWWDV 409
           HG  T D  +++MF ++  +W  V
Sbjct: 858 HGFLTYDDRQLRMFVRRNGDWTGV 881


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 338 HGRTTLDSSEIKMFSKQMSEWWDV 409
           HG  T D  +++MF ++  +W  V
Sbjct: 859 HGFLTYDDRQLRMFVRRNGDWTGV 882


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 386 QMSEWWDVNGYLKSLHAMNKVRIPLIRD 469
           ++++W +  G   S   MN + +P +RD
Sbjct: 84  KLNKWEEAYGLFVSFSHMNTLELPALRD 111


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 552 KMPPPQPTSRIFLS 511
           +M PP PT R+F+S
Sbjct: 452 RMGPPPPTGRLFVS 465


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,573
Number of Sequences: 2352
Number of extensions: 11105
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)