Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15d14f
         (604 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA...    31   0.91 
U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type ...    29   4.9  
AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p pro...    29   4.9  
AE014297-3682|AAN14029.1|  305|Drosophila melanogaster CG31422-P...    29   4.9  
AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA...    29   4.9  
AY060637-1|AAL28185.1|  344|Drosophila melanogaster GH05565p pro...    29   6.4  
AY060281-1|AAL25320.1|  244|Drosophila melanogaster GH12331p pro...    29   6.4  
AE014298-2034|AAF48372.2|  344|Drosophila melanogaster CG32600-P...    29   6.4  
AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.     28   8.5  

>AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA
           protein.
          Length = 1579

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +3

Query: 426 DSDGERELAMMYRPDCSSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIG 587
           +S G+ E+     P+ SSD + +D   + +A  A++S P+SQ   +   + ++G
Sbjct: 759 ESSGDEEVQQHPDPNWSSDEMDVDFEALDAAVEASLSQPVSQEKAASPIKTYVG 812


>U66411-2|AAB71082.1|  397|Drosophila melanogaster putative type III
           alcohol dehydrogenaseprotein.
          Length = 397

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 149 NSISIAIYRETQVIVTDGSFW*MIE 223
           N I+  +Y ET+V  TDGS W  +E
Sbjct: 97  NGINYEVYDETRVEPTDGSMWHAVE 121


>AY060914-1|AAL28462.1|  425|Drosophila melanogaster GM05887p
           protein.
          Length = 425

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 149 NSISIAIYRETQVIVTDGSFW*MIE 223
           N I+  +Y ET+V  TDGS W  +E
Sbjct: 58  NGINYEVYDETRVEPTDGSMWHAVE 82


>AE014297-3682|AAN14029.1|  305|Drosophila melanogaster CG31422-PA
           protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 468 DCSSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIGP 590
           D   D V++D    A+A+ AA++  +SQL + +   V  GP
Sbjct: 260 DDDDDAVVVDAAAFAAAAAAALAASVSQLAIKRLFAVWFGP 300


>AE013599-3380|AAF46832.1|  464|Drosophila melanogaster CG3425-PA
           protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 149 NSISIAIYRETQVIVTDGSFW*MIE 223
           N I+  +Y ET+V  TDGS W  +E
Sbjct: 97  NGINYEVYDETRVEPTDGSMWHAVE 121


>AY060637-1|AAL28185.1|  344|Drosophila melanogaster GH05565p
           protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 500 TNDSISFTCSSFAAYITA*RVQIIEGPHRAXVRIG 604
           T DS  +TC+   A  T+ RV I++G H A +  G
Sbjct: 218 TQDSGLYTCTPSNANPTSVRVHIVDGEHPAAMHTG 252


>AY060281-1|AAL25320.1|  244|Drosophila melanogaster GH12331p
           protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 500 TNDSISFTCSSFAAYITA*RVQIIEGPHRAXVRIG 604
           T DS  +TC+   A  T+ RV I++G H A +  G
Sbjct: 118 TQDSGLYTCTPSNANPTSVRVHIVDGEHPAAMHTG 152


>AE014298-2034|AAF48372.2|  344|Drosophila melanogaster CG32600-PA
           protein.
          Length = 344

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 500 TNDSISFTCSSFAAYITA*RVQIIEGPHRAXVRIG 604
           T DS  +TC+   A  T+ RV I++G H A +  G
Sbjct: 218 TQDSGLYTCTPSNANPTSVRVHIVDGEHPAAMHTG 252


>AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.
          Length = 1530

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = +3

Query: 426 DSDGERELAMMYRPDCSSDFVLMDERMIASASRAAVSPPISQLNVSKSSRVHIG 587
           +S  + E+     P+ SSD + +D   + +A  A++S P+SQ   +   + ++G
Sbjct: 710 ESSEDEEVQQHPDPNWSSDEMDVDFEALDAAVEASLSQPVSQEKAASPIKTYVG 763


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,377,338
Number of Sequences: 53049
Number of extensions: 402312
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)