Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15d13r
(912 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.14
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 28 0.14
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 26 0.55
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 25 0.72
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.72
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.7
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 2.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 6.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 6.7
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.14
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 536 PTLGTPLTAVLYRPLARPRQST 601
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 27.9 bits (59), Expect = 0.14
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 852 EPAEEDILMSRNGANNQYWLFTRRXQNNHQVITNGNVNSIRNSNYNGNLPLFVIVXGWNS 673
+P +E+ + GA L T + +N+ IT GN N+ ++N N N G N
Sbjct: 200 QPEDEECTEATAGA---VVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGAND 256
Query: 672 NGN 664
NGN
Sbjct: 257 NGN 259
Score = 25.0 bits (52), Expect = 0.96
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 774 NNHQVITNGNVNSIRNSNYNGNL 706
NN+ NGN N N+N NG++
Sbjct: 250 NNNGANDNGNGNGASNNNNNGDM 272
Score = 23.4 bits (48), Expect = 2.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 789 TRRXQNNHQVITNGNVNSIRNSNYNGN 709
T NN+ N N N+ N N NGN
Sbjct: 235 TNASNNNNNNNNNNNNNNGANDNGNGN 261
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 25.8 bits (54), Expect = 0.55
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 95 VPSSMGNAVFGKRGNGIYGLRTGSSWPF*KY 3
VPSS+ N V K+G G LR W F KY
Sbjct: 92 VPSSL-NVVTNKKGKGGPLLRPYPDWSFAKY 121
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 25.4 bits (53), Expect = 0.72
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -2
Query: 95 VPSSMGNAVFGKRGNGIYGLRTGSSWPF*KY 3
VPSS+ N V K GNG L+ W F KY
Sbjct: 91 VPSSL-NVVSDKTGNGGRLLQPYPDWSFAKY 120
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.72
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 795 LFTRRXQNNHQVITNGNVNSIRNSNYNGN 709
L + NN+ N N N+ N+NYN N
Sbjct: 318 LSNKTIHNNNNYKYNYNNNNYNNNNYNNN 346
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 358 TTPPGPSRIQTGNPVGSATSLSSS 429
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 774 NNHQVITNGNVNSIRNSNYNGN 709
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 753 NGNVNSIRNSNYNGN 709
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 774 NNHQVITNGNVNSIRNSNYNGN 709
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 753 NGNVNSIRNSNYNGN 709
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 586 TTPVHNNNVAVGDGQQGGAD 645
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 586 TTPVHNNNVAVGDGQQGGAD 645
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 774 NNHQVITNGNVNSIRNSNYN 715
NN++ N N+ N+NYN
Sbjct: 320 NNYKYSNYNNYNNYNNNNYN 339
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 194 RL*EQVLTLQPGWGFLPPLG*KSP 265
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 753 NGNVNSIRNSNYNGNLPLF 697
N N N+ N+NYN L+
Sbjct: 335 NNNYNNYNNNNYNNYKKLY 353
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = -2
Query: 905 DTFGCLMXRVFLTSLTWKNRPRKTSLCQGTVQTTNTGFSPD 783
D C++ + + K+ P + C V TT +PD
Sbjct: 1440 DETSCMLDKTRAQTFDGKDYPLRLGPCWHAVMTTYPRINPD 1480
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 789 TRRXQNNHQVITNGNVNSIRNSNYNGN 709
T +N+Q N N+ +N+N N N
Sbjct: 426 TNNQNDNNQKNNKKNANNQKNNNQNDN 452
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,604
Number of Sequences: 438
Number of extensions: 7778
Number of successful extensions: 42
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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