Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15d13f
(554 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0044 - 583349-584044 31 0.62
12_02_0642 + 21454142-21454251,21454683-21454872,21454988-214550... 31 0.82
12_02_0639 + 21443480-21443589,21444022-21444211,21444327-214444... 31 0.82
12_02_0633 + 21402847-21402862,21403143-21404975,21405052-214051... 31 0.82
10_08_0848 + 21035446-21035461,21035742-21036233,21036400-210369... 31 0.82
05_03_0187 + 9413575-9414895,9415014-9415289,9415513-9415631,941... 31 0.82
05_03_0065 - 7953414-7953845,7953963-7954081,7954158-7955990,795... 31 0.82
01_06_0544 + 30118208-30118417,30118959-30119063,30119179-301192... 31 0.82
01_04_0076 + 15780981-15780996,15781277-15783109,15783186-157833... 31 0.82
02_04_0199 - 20861793-20862023,20862588-20862798,20863260-208641... 29 1.9
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 29 2.5
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 29 2.5
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 29 3.3
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 29 3.3
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 3.3
12_02_1175 + 26702744-26704507 28 4.4
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 28 4.4
10_06_0012 - 9586478-9588880 28 5.8
07_03_1342 - 25891761-25892102,25892588-25893135,25893342-258950... 28 5.8
07_01_0452 - 3418572-3418763,3419140-3419223 28 5.8
01_01_0556 + 4090432-4090500,4091414-4092030,4092408-4092533,409... 28 5.8
04_03_0052 + 10257109-10257337,10257580-10257668,10257708-102582... 27 7.6
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 27 7.6
>10_01_0044 - 583349-584044
Length = 231
Score = 31.1 bits (67), Expect = 0.62
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = -2
Query: 532 SVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADH--GVH--S 365
+VV + +V ++ TG+S DG + +G + N G Q+ DH GVH
Sbjct: 71 TVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQPSNKGATNGSAQENQGDHSQGVHGVQ 130
Query: 364 GVSVAVP---AVDNNKERQVSIVVRVPDRVDIAICN 266
G P +++ + DRVD A+ N
Sbjct: 131 GDGTQGPRGGSLNQDGSASQEFFNNFQDRVDYAVHN 166
>12_02_0642 +
21454142-21454251,21454683-21454872,21454988-21455069,
21455224-21455802,21455854-21456909,21457133-21457251,
21457369-21457812
Length = 859
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0639 +
21443480-21443589,21444022-21444211,21444327-21444408,
21444563-21445054,21445221-21446246,21446470-21446588,
21446706-21447149
Length = 820
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 157 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 191
>12_02_0633 +
21402847-21402862,21403143-21404975,21405052-21405170,
21405288-21405722
Length = 800
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>10_08_0848 +
21035446-21035461,21035742-21036233,21036400-21036956,
21037084-21037539,21037886-21038302
Length = 645
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>05_03_0187 +
9413575-9414895,9415014-9415289,9415513-9415631,
9415749-9416192
Length = 719
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 39 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 73
>05_03_0065 -
7953414-7953845,7953963-7954081,7954158-7955990,
7957103-7957559
Length = 946
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 182 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 216
>01_06_0544 +
30118208-30118417,30118959-30119063,30119179-30119260,
30119415-30121250,30121327-30121445,30121563-30122006
Length = 931
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 162 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 196
>01_04_0076 +
15780981-15780996,15781277-15783109,15783186-15783304,
15783422-15783724
Length = 756
Score = 30.7 bits (66), Expect = 0.82
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 328 CYCPRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGL 432
C+CP + ++ LRC++ D AG R++ + G+
Sbjct: 35 CFCPDITKKHHLRCKYCDKVCTAGITRIKYHLAGI 69
>02_04_0199 -
20861793-20862023,20862588-20862798,20863260-20864142,
20864363-20865608
Length = 856
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 549 RPQLPP-PLLMSQTKKLPRNCPTLGTPLTAVLYR--PLARPR 433
RP LPP P L+S T P P +GTP + R P AR R
Sbjct: 467 RPPLPPSPPLLSSTTATPPPTPPVGTPKSEAADRRPPPARRR 508
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 210 VQTTNTGFSPXVTKTTIKLLQMAMSTLSGTRTTMETC 320
VQ +GF K+ KL+Q+++S L RT E C
Sbjct: 845 VQNNLSGFEVTQLKSMNKLVQLSVSQLENVRTQEEAC 881
>01_01_0161 -
1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 435 VVLPTVYTTLPSMEFPVSDSSLATFWSGSSTTEAAIGVES 554
VV PT YT S E+P ++ T+W + A + V+S
Sbjct: 796 VVDPTAYTIGRSAEWPEDGPTMGTYWCRRGRSYAHVQVDS 835
>08_01_0461 -
4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 40 WLNSIVFWQCYPHDPWRQQSLCGRCKPIRLDA*WRGCSS 156
WL+S +F CYP P+ ++++ LD W C S
Sbjct: 769 WLSSFLFNSCYPSGPYERRTIAMELILTLLDV-WPICRS 806
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +2
Query: 158 LVDLEXPAEEDILMSRNGANNQYWLFTXRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIV 337
L D + + +L+S++ NN N N++ N N NS N Y G + + +
Sbjct: 165 LGDKDEEVDSWLLLSKDSDNNN----NNNNNNDNDNNDNNNSNSSNNGMYFGEVDEYFDL 220
Query: 338 HGWNS 352
G+NS
Sbjct: 221 VGYNS 225
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 337 PRLEQQRKLRCEHHDPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWS 477
P L +Q E +P R+ R + ++ C L W+ S+Q +WS
Sbjct: 812 PTLGEQPAQPTESAEPNRIIPRPKERQDCNQLTWTTAPSLQFLNRWS 858
>12_02_1175 + 26702744-26704507
Length = 587
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 537 PPPLLMSQTKKLPRNCP-TLGTPLTAVLYRPLARPRQSTTITLQSETASK 391
PPPL +S + K P + P T L +L+ PL PR+ T + + SK
Sbjct: 313 PPPLPVSSSSK-PTSAPRTFARRLVDLLHSPLYLPRRLTIPDIAAHRWSK 361
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Frame = +3
Query: 405 PTATLLLWT--GVVLPTVYTTLPSMEFPV---SDSSLAT----FWSGSSTTEAAIGVES 554
P +T+L+WT G ++ VYTT+P P+ +++++AT S + TEA G+ +
Sbjct: 19 PASTMLVWTQVGEIVFPVYTTMPISTCPLMTGNENAVATNRDDSMSKDTPTEAKNGIST 77
>10_06_0012 - 9586478-9588880
Length = 800
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 344 WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
W++NG + V P L SD N++++D + N +++T VN
Sbjct: 78 WSANGENPVVDPASPELAISSDGNMVILD-QVTKNIIWSTHVN 119
>07_03_1342 -
25891761-25892102,25892588-25893135,25893342-25895012,
25895818-25896745
Length = 1162
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 210 VQTTNTGFS---PXVTKTTIKLLQMAMSTLSGT 299
V + GFS P V TT+KLL ++ +T SG+
Sbjct: 301 VDLSRNGFSGSVPVVNSTTLKLLNLSSNTFSGS 333
>07_01_0452 - 3418572-3418763,3419140-3419223
Length = 91
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -3
Query: 507 KLPRNCPTLGTPL---TAVLYRPLARPRQSTTITLQSET 400
KL NCPT G P T L +PL R + T L S T
Sbjct: 42 KLKINCPTTGLPSVDHTNHLIKPLGCARDANTTALYSTT 80
>01_01_0556 +
4090432-4090500,4091414-4092030,4092408-4092533,
4092619-4092895,4093021-4093251
Length = 439
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 224 YWLFTXRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHG---WNSNGNSAVNTMIRPAL 394
YW F RN+ N + + V+S R+ + + HG +S N V + P +
Sbjct: 171 YWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVARIASPRV 230
Query: 395 LAVSDCNVIVVD 430
A+ C + +D
Sbjct: 231 YALVACFKLALD 242
>04_03_0052 +
10257109-10257337,10257580-10257668,10257708-10258289,
10258477-10258668,10259392-10259563,10260190-10260461,
10260682-10260801,10260912-10260968,10261631-10261831,
10262451-10262511,10262712-10263013
Length = 758
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 532 SVVDEPDQKVAKELSDTGNSIDGSVV*TVGKTTPVHNNNVAVGDGQQGGADHGV 371
+VV + K+ ++ TG+S DG V TT G G G GV
Sbjct: 691 TVVQKYKVKLVADVPGTGSSKDGEVQQVSAGTTESGGKGAVEGSGDNGDRSQGV 744
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 248 QNNHQVITNGNVNSIRNSNYNGNLP 322
QN+ QV+ + N++ N N NGN P
Sbjct: 638 QNSSQVMGSQAANNMNNENRNGNYP 662
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,178,373
Number of Sequences: 37544
Number of extensions: 384526
Number of successful extensions: 1389
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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