Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15d12f
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 64 6e-11
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 64 6e-11
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 38 0.007
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 33 0.21
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 33 0.21
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 5.9
U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein. 28 5.9
U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical pr... 28 5.9
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 64.5 bits (150), Expect = 6e-11
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGEVTIYTSPTVANVNEVV-IHCNDLTIQ 337
RLPT P HY V L+P +N F+FDG TI T+ +V+ +H L IQ
Sbjct: 15 RLPTFAEPTHYNVRLSPC-------LNQFSFDGHATI--DVTIKEATDVLKVHAQSLLIQ 65
Query: 338 SLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTNMR 517
S+S+ Q G D + + +T + + + L I+ + + + F G L MR
Sbjct: 66 SVSLITQPG----DASKSLET-SYDDKLNILTIKLPTTMQPQKVQL-DFKFVGELNDKMR 119
Query: 518 GFYRSWYVDSTG-RRWMGTTQFQPGHAR 598
GFYRS Y D G +++ +TQF+ +AR
Sbjct: 120 GFYRSQYKDKNGTEKFLASTQFESTYAR 147
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 64.5 bits (150), Expect = 6e-11
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGEVTIYTSPTVANVNEVV-IHCNDLTIQ 337
RLPT P HY V L+P +N F+FDG TI T+ +V+ +H L IQ
Sbjct: 79 RLPTFAEPTHYNVRLSPC-------LNQFSFDGHATI--DVTIKEATDVLKVHAQSLLIQ 129
Query: 338 SLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTNMR 517
S+S+ Q G D + + +T + + + L I+ + + + F G L MR
Sbjct: 130 SVSLITQPG----DASKSLET-SYDDKLNILTIKLPTTMQPQKVQL-DFKFVGELNDKMR 183
Query: 518 GFYRSWYVDSTG-RRWMGTTQFQPGHAR 598
GFYRS Y D G +++ +TQF+ +AR
Sbjct: 184 GFYRSQYKDKNGTEKFLASTQFESTYAR 211
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 45.6 bits (103), Expect = 3e-05
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFD--VVPANVNPFTFDGEVTIYTSPTVANVNEVVIHCNDLTI 334
RLPT+ P YQ+T+ Y A+ N TF+G+V I + T ++ +V ++ DL
Sbjct: 73 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNIT-KSIKKVSLNSKDLNY 131
Query: 335 QSLSIGYQS-GTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTN 511
I S N I T F + E + +K F L+T+
Sbjct: 132 TEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNL--DETVEPTTSATLKVAFGAPLRTD 189
Query: 512 MRGFYRSWYVDSTGRRWM-GTTQFQPGHARQ 601
M G Y++ Y +S G M TQ +P +AR+
Sbjct: 190 MSGLYQTTYTNSKGESKMAAVTQMEPVYARR 220
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 45.6 bits (103), Expect = 3e-05
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +2
Query: 161 RLPTTTRPRHYQVTLTPYFD--VVPANVNPFTFDGEVTIYTSPTVANVNEVVIHCNDLTI 334
RLPT+ P YQ+T+ Y A+ N TF+G+V I + T ++ +V ++ DL
Sbjct: 85 RLPTSVSPISYQLTVKTYLPGYGYTADKNNLTFEGQVLIELNIT-KSIKKVSLNSKDLNY 143
Query: 335 QSLSIGYQS-GTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKSTFRGNLQTN 511
I S N I T F + E + +K F L+T+
Sbjct: 144 TEEFIKKSSILVNGKSIAFTLDDKQSTHEKIFFNL--DETVEPTTSATLKVAFGAPLRTD 201
Query: 512 MRGFYRSWYVDSTGRRWM-GTTQFQPGHARQ 601
M G Y++ Y +S G M TQ +P +AR+
Sbjct: 202 MSGLYQTTYTNSKGESKMAAVTQMEPVYARR 232
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 37.5 bits (83), Expect = 0.007
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = +2
Query: 134 ARMLRDPAFRLPTTTRPRHYQVTLTPYFDVV--PANVNPFTFDGEVTIYTSPTVANVNEV 307
AR+ ++RLP P HY + + Y A+ N TF+G V I +++
Sbjct: 22 ARIADVASYRLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILLD-IKETTDKL 80
Query: 308 VIHCNDLTIQSLSIGYQSGTNVVDITATGQTFACEMPFSFLRIRTTEALVLNREYIIKST 487
V+H + L I +S +QS V I+ + + FL + + I+
Sbjct: 81 VLHSSSLNI--ISATFQSDEQNVSIS----HWNVQTESQFLTFYLNNTVKVQSSAGIQIN 134
Query: 488 FRGNLQTNMRGFYRSWYVDSTGRRWMG-TTQFQPGHAR 598
F+G ++T+ G + + G TQF+ AR
Sbjct: 135 FQGKVRTDGLGLFATNSTREDGTVMTNFATQFETIFAR 172
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 31 NGISLVLLPRGRSLLTNFTNVKPHTSTRR*VG*ICEDASGSGVSSSNDHTPETLSSNTDS 210
N +SL+L+P +NF + PH+ T + SGSG SSS TPE +++ S
Sbjct: 179 NPLSLLLMPHFLKNSSNFESSTPHSET--------SEISGSGSSSSKTPTPEAGFNSSFS 230
Query: 211 I 213
I
Sbjct: 231 I 231
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 31 NGISLVLLPRGRSLLTNFTNVKPHTSTRR*VG*ICEDASGSGVSSSNDHTPETLSSNTDS 210
N +SL+L+P +NF + PH+ T + SGSG SSS TPE +++ S
Sbjct: 179 NPLSLLLMPHFLKNSSNFESSTPHSET--------SEISGSGSSSSKTPTPEAGFNSSFS 230
Query: 211 I 213
I
Sbjct: 231 I 231
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +2
Query: 83 SLTLSPIPVPEDEWVEFARMLRDPAFRLPTTTRPRHYQVTLTPYFDVVPANVNPFTFDGE 262
+L +SP+ PED R+ DP F P +T + V + P P + FT +
Sbjct: 99 TLRVSPV-TPEDSGTYRCRLETDPLFSSPQSTATQELAVMVKPVAPSSP-EIKTFT-NRS 155
Query: 263 VTIYTSPTVANVNEVVI 313
+T+ + A + ++
Sbjct: 156 ITLVWTHNAARAHRPIL 172
>U70870-1|AAB51198.1| 1404|Caenorhabditis elegans CELF35-1 protein.
Length = 1404
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 467 EYIIKSTFRGNLQTNMRGFYRSWYVDSTGRR--WMGTTQFQP 586
+Y+I S RGN M G WY+ + + + GT QP
Sbjct: 751 DYLIASKIRGNHVNVMMGEAHDWYLHAPNNKELFPGTVSVQP 792
>U40934-5|AAA81683.2| 1404|Caenorhabditis elegans Hypothetical
protein F35H10.10 protein.
Length = 1404
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 467 EYIIKSTFRGNLQTNMRGFYRSWYVDSTGRR--WMGTTQFQP 586
+Y+I S RGN M G WY+ + + + GT QP
Sbjct: 751 DYLIASKIRGNHVNVMMGEAHDWYLHAPNNKELFPGTVSVQP 792
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,141,666
Number of Sequences: 27780
Number of extensions: 298438
Number of successful extensions: 865
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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