Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15d12f
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.0  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.0  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 582 WNWVVPIHLLPVLSTY 535
           W WV P  +LP+L  +
Sbjct: 179 WFWVTPFTVLPLLKVW 194


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 582 WNWVVPIHLLPVLSTY 535
           W WV P  +LP+L  +
Sbjct: 179 WFWVTPFTVLPLLKVW 194


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = -3

Query: 196 LIMSRACGRWKTKRRIPK 143
           L++   CG+W +++  P+
Sbjct: 361 LMLPNCCGKWSSQKSEPR 378


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 166 KTKRRIPKHPRKFNP 122
           +T  RI KH  KFNP
Sbjct: 171 ETYLRIKKHAVKFNP 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,671
Number of Sequences: 438
Number of extensions: 4086
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)