Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15d08f
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023646-1|AAY85046.1|  159|Drosophila melanogaster IP05492p pro...    51   1e-06
AE014296-2003|AAF50027.1|  120|Drosophila melanogaster CG14133-P...    50   2e-06
AE014298-681|AAF45986.1|  479|Drosophila melanogaster CG6978-PA ...    30   2.8  
AY069647-1|AAL39792.1|  337|Drosophila melanogaster LD41395p pro...    29   5.0  
AE014296-2974|AAF49295.1|  337|Drosophila melanogaster CG5546-PA...    29   5.0  

>BT023646-1|AAY85046.1|  159|Drosophila melanogaster IP05492p
           protein.
          Length = 159

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 30/112 (26%), Positives = 55/112 (49%)
 Frame = +1

Query: 16  PTIDRNTMENTEKADLNDAKTCNLLAKGILELYEPPLTTINTHLKELTEKQDAIHNTIKF 195
           P  D  T  +++  ++  +     L+ G+L++ EPPL  + T L+EL  +Q+  +  +  
Sbjct: 24  PKQDAETCCSSQDNEVMASLAALQLSAGVLQIAEPPLNHVRTQLRELIGRQNKTYIDLSK 83

Query: 196 ERQKLEDIQNXXXXXXXXXXIATNREKLLTISNSMMVLHKRVQSLQVRAANV 351
           E+ KL D             +   ++KL  I   M  +++R + L+ RAANV
Sbjct: 84  EKYKL-DCSEVARLNDMMSDVKRYKDKLTKIKKEMQGVYQRTKELKKRAANV 134


>AE014296-2003|AAF50027.1|  120|Drosophila melanogaster CG14133-PA
           protein.
          Length = 120

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 27/88 (30%), Positives = 46/88 (52%)
 Frame = +1

Query: 88  LAKGILELYEPPLTTINTHLKELTEKQDAIHNTIKFERQKLEDIQNXXXXXXXXXXIATN 267
           L+ G+L++ EPPL  + T L+EL  +Q+  +  +  E+ KL D             +   
Sbjct: 9   LSAGVLQIAEPPLNHVRTQLRELIGRQNKTYIDLSKEKYKL-DCSEVARLNDMMSDVKRY 67

Query: 268 REKLLTISNSMMVLHKRVQSLQVRAANV 351
           ++KL  I   M  +++R + L+ RAANV
Sbjct: 68  KDKLTKIKKEMQGVYQRTKELKKRAANV 95


>AE014298-681|AAF45986.1|  479|Drosophila melanogaster CG6978-PA
           protein.
          Length = 479

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -2

Query: 322 ALFYVVPSLNSIWLIVFLCLLQ 257
           ++FY+    ++IW I+F+CL+Q
Sbjct: 222 SIFYIFGLFSTIWCIIFICLVQ 243


>AY069647-1|AAL39792.1|  337|Drosophila melanogaster LD41395p
           protein.
          Length = 337

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 10  KNPTIDRNTMENTEKADLNDAKTCNLLAKG-ILELYEPPLTTINTHLKELTEKQDAIHNT 186
           ++P + R     T K  ++  KT  ++  G    + EPP     T  K+L  +    H  
Sbjct: 21  RSPVVARQDSSGTLKTTISLGKTPTIIHTGPFYSMKEPPAKAELTGDKDLMTEYGLHHTL 80

Query: 187 IKFERQKLED 216
            KF+ +K ++
Sbjct: 81  TKFKEKKFKE 90


>AE014296-2974|AAF49295.1|  337|Drosophila melanogaster CG5546-PA
           protein.
          Length = 337

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 10  KNPTIDRNTMENTEKADLNDAKTCNLLAKG-ILELYEPPLTTINTHLKELTEKQDAIHNT 186
           ++P + R     T K  ++  KT  ++  G    + EPP     T  K+L  +    H  
Sbjct: 21  RSPVVARQDSSGTLKTTISLGKTPTIIHTGPFYSMKEPPAKAELTGDKDLMTEYGLHHTL 80

Query: 187 IKFERQKLED 216
            KF+ +K ++
Sbjct: 81  TKFKEKKFKE 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,449,871
Number of Sequences: 53049
Number of extensions: 511207
Number of successful extensions: 1245
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)