Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15c02f
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29678-1|CAA82775.1|  419|Homo sapiens MITF protein protein.           34   0.37 
BC065243-1|AAH65243.1|  419|Homo sapiens microphthalmia-associat...    34   0.37 
BC026961-1|AAH26961.1|  413|Homo sapiens microphthalmia-associat...    34   0.37 
AB006909-1|BAA32288.1|  520|Homo sapiens A-type microphthalmia a...    34   0.37 
U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly prote...    33   0.86 
M86667-1|AAC37544.1|  391|Homo sapiens NAP protein.                    33   0.86 
BT007023-1|AAP35669.1|  391|Homo sapiens nucleosome assembly pro...    33   0.86 
BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly pro...    33   0.86 
BC002387-1|AAH02387.1|  391|Homo sapiens nucleosome assembly pro...    33   0.86 
U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co...    32   1.5  
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-...    32   1.5  
AB208965-1|BAD92202.1|  705|Homo sapiens Rho-associated, coiled-...    32   1.5  
BC017070-1|AAH17070.3|  413|Homo sapiens clusterin associated pr...    31   3.5  
AK023359-1|BAB14542.1|  247|Homo sapiens protein ( Homo sapiens ...    31   3.5  
AB089691-1|BAD44779.1|  413|Homo sapiens clusterin associated pr...    31   3.5  
AB014543-1|BAA31618.1|  403|Homo sapiens KIAA0643 protein protein.     31   3.5  

>Z29678-1|CAA82775.1|  419|Homo sapiens MITF protein protein.
          Length = 419

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 279 LEWKKGTNIK--LNPIKLSKRQRKRRKHLKDRTKKGKTQAQNSLLQMNEME 425
           + W KGT +K  ++ I+  +R+++R K L++R KK +   ++ LL++ E+E
Sbjct: 239 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELE 289


>BC065243-1|AAH65243.1|  419|Homo sapiens microphthalmia-associated
           transcription factor protein.
          Length = 419

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 279 LEWKKGTNIK--LNPIKLSKRQRKRRKHLKDRTKKGKTQAQNSLLQMNEME 425
           + W KGT +K  ++ I+  +R+++R K L++R KK +   ++ LL++ E+E
Sbjct: 239 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELE 289


>BC026961-1|AAH26961.1|  413|Homo sapiens microphthalmia-associated
           transcription factor protein.
          Length = 413

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 279 LEWKKGTNIK--LNPIKLSKRQRKRRKHLKDRTKKGKTQAQNSLLQMNEME 425
           + W KGT +K  ++ I+  +R+++R K L++R KK +   ++ LL++ E+E
Sbjct: 233 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELE 283


>AB006909-1|BAA32288.1|  520|Homo sapiens A-type microphthalmia
           associated transcription factor protein.
          Length = 520

 Score = 33.9 bits (74), Expect = 0.37
 Identities = 17/51 (33%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = +3

Query: 279 LEWKKGTNIK--LNPIKLSKRQRKRRKHLKDRTKKGKTQAQNSLLQMNEME 425
           + W KGT +K  ++ I+  +R+++R K L++R KK +   ++ LL++ E+E
Sbjct: 340 MRWNKGTILKASVDYIRKLQREQQRAKELENRQKKLEHANRHLLLRIQELE 390


>U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly protein
           2 protein.
          Length = 375

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 CPHCCLEWKKGTNIKLNPIKLSKRQRKRRKHLKDRTKK 377
           C  C ++WKKG N+ +  IK  K++ K R  ++  TK+
Sbjct: 247 CDGCTIDWKKGKNVTVKTIK-KKQKHKGRGTVRTITKQ 283


>M86667-1|AAC37544.1|  391|Homo sapiens NAP protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 264 CPHCCLEWKKGTNIKLNPIKLSKRQRKRRKHLKDRTK 374
           C  C ++WKKG N+ L  IK  K++ K R  ++  TK
Sbjct: 255 CTGCQIDWKKGKNVTLKTIK-KKQKHKGRGTVRTVTK 290


>BT007023-1|AAP35669.1|  391|Homo sapiens nucleosome assembly
           protein 1-like 2 protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 264 CPHCCLEWKKGTNIKLNPIKLSKRQRKRRKHLKDRTK 374
           C  C ++WKKG N+ L  IK  K++ K R  ++  TK
Sbjct: 255 CTGCQIDWKKGKNVTLKTIK-KKQKHKGRGTVRTVTK 290


>BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly
           protein 1-like 4 protein.
          Length = 375

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 264 CPHCCLEWKKGTNIKLNPIKLSKRQRKRRKHLKDRTKK 377
           C  C ++WKKG N+ +  IK  K++ K R  ++  TK+
Sbjct: 247 CDGCTIDWKKGKNVTVKTIK-KKQKHKGRGTVRTITKQ 283


>BC002387-1|AAH02387.1|  391|Homo sapiens nucleosome assembly
           protein 1-like 1 protein.
          Length = 391

 Score = 32.7 bits (71), Expect = 0.86
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 264 CPHCCLEWKKGTNIKLNPIKLSKRQRKRRKHLKDRTK 374
           C  C ++WKKG N+ L  IK  K++ K R  ++  TK
Sbjct: 255 CTGCQIDWKKGKNVTLKTIK-KKQKHKGRGTVRTVTK 290


>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
           containing protein kinase p160ROCK protein.
          Length = 1354

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 330 KRQRKRRKHLKDRTKKGKTQAQNSLLQMNEMEKICMFCKKSVKTQILKPDRIKPKAIMEN 509
           K+ +++ +HL    ++ + + +N  LQ+ +     +  +  +KTQ  + D +K    +E 
Sbjct: 749 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 805

Query: 510 NMKNSIN 530
            MK  IN
Sbjct: 806 QMKQEIN 812


>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated,
           coiled-coil containing protein kinase 1 protein.
          Length = 1354

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 330 KRQRKRRKHLKDRTKKGKTQAQNSLLQMNEMEKICMFCKKSVKTQILKPDRIKPKAIMEN 509
           K+ +++ +HL    ++ + + +N  LQ+ +     +  +  +KTQ  + D +K    +E 
Sbjct: 749 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 805

Query: 510 NMKNSIN 530
            MK  IN
Sbjct: 806 QMKQEIN 812


>AB208965-1|BAD92202.1|  705|Homo sapiens Rho-associated,
           coiled-coil containing protein kinase 1 variant protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/67 (23%), Positives = 34/67 (50%)
 Frame = +3

Query: 330 KRQRKRRKHLKDRTKKGKTQAQNSLLQMNEMEKICMFCKKSVKTQILKPDRIKPKAIMEN 509
           K+ +++ +HL    ++ + + +N  LQ+ +     +  +  +KTQ  + D +K    +E 
Sbjct: 427 KQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKG---LEK 483

Query: 510 NMKNSIN 530
            MK  IN
Sbjct: 484 QMKQEIN 490


>BC017070-1|AAH17070.3|  413|Homo sapiens clusterin associated
           protein 1 protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 381 KTQAQNSLLQMNEMEKICMFCKKSVKTQILK-PDRIKPKAIMENNMKNSINNRSIE 545
           +T+A    L++NE EK+     K + TQ+ K  D +   A  E N++  I  R +E
Sbjct: 168 RTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLE 223


>AK023359-1|BAB14542.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13297 fis, clone OVARC1001271, weakly similar to
           NUCLEOLAR TRANSCRIPTION FACTOR 1. ).
          Length = 247

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 381 KTQAQNSLLQMNEMEKICMFCKKSVKTQILK-PDRIKPKAIMENNMKNSINNRSIE 545
           +T+A    L++NE EK+     K + TQ+ K  D +   A  E N++  I  R +E
Sbjct: 2   RTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLE 57


>AB089691-1|BAD44779.1|  413|Homo sapiens clusterin associated
           protein 1 protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 381 KTQAQNSLLQMNEMEKICMFCKKSVKTQILK-PDRIKPKAIMENNMKNSINNRSIE 545
           +T+A    L++NE EK+     K + TQ+ K  D +   A  E N++  I  R +E
Sbjct: 168 RTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLE 223


>AB014543-1|BAA31618.1|  403|Homo sapiens KIAA0643 protein protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 381 KTQAQNSLLQMNEMEKICMFCKKSVKTQILK-PDRIKPKAIMENNMKNSINNRSIE 545
           +T+A    L++NE EK+     K + TQ+ K  D +   A  E N++  I  R +E
Sbjct: 184 RTEAIARPLEINETEKVMRIAIKEILTQVQKTKDLLNNVASDEANLEAKIEKRKLE 239


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,665,349
Number of Sequences: 237096
Number of extensions: 1078041
Number of successful extensions: 2725
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)