Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15b02r
         (926 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    67   2e-13
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           67   2e-13
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.9  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   5.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   5.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   9.1  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 66.9 bits (156), Expect = 2e-13
 Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
 Frame = -3

Query: 714 PFLGESSYQLLAKGEFAKVPFMTGLSEREGLLMV---LLGPQVLDKLAKE-----KKFID 559
           PF+  +  +++  G+   VP++TG++  EGL  V   +  P+ L  L +        F+D
Sbjct: 314 PFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFIAKPEALKLLDENWDLIAPYFLD 373

Query: 558 YFPFVLDPVEETELESRLKSIYLEGEQTSKDVDGFAINYFTDVDFLGGIYTAATLIAKHN 379
           Y  + +   +  E+   +++ Y E  +  +      I+  +D  F+     AA + AK N
Sbjct: 374 Y-NYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVN 432

Query: 378 -SPVYLYEFCYDGALNYLKKLNQI-DRVGAAHADEGGYILRCEALKDALSDTDKRVQEVL 205
             PV+ Y + Y GA +  + ++   ++ G  HAD+   ++    L    +  D ++Q+VL
Sbjct: 433 RQPVWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVL 492

Query: 204 LTLWTNFARYGNP 166
           +  W +F   G P
Sbjct: 493 IDFWVSFVNNGVP 505


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 66.9 bits (156), Expect = 2e-13
 Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
 Frame = -3

Query: 714 PFLGESSYQLLAKGEFAKVPFMTGLSEREGLLMV---LLGPQVLDKLAKE-----KKFID 559
           PF+  +  +++  G+   VP++TG++  EGL  V   +  P+ L  L +        F+D
Sbjct: 314 PFIDRTPIEIINSGDVQDVPWVTGVTSEEGLYPVAEFIAKPEALKLLDENWDLIAPYFLD 373

Query: 558 YFPFVLDPVEETELESRLKSIYLEGEQTSKDVDGFAINYFTDVDFLGGIYTAATLIAKHN 379
           Y  + +   +  E+   +++ Y E  +  +      I+  +D  F+     AA + AK N
Sbjct: 374 Y-NYTIPKEKHVEVARLIRNYYFESNKIDETTLKHLIDVASDRFFITDGEKAARMQAKVN 432

Query: 378 -SPVYLYEFCYDGALNYLKKLNQI-DRVGAAHADEGGYILRCEALKDALSDTDKRVQEVL 205
             PV+ Y + Y GA +  + ++   ++ G  HAD+   ++    L    +  D ++Q+VL
Sbjct: 433 RQPVWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVL 492

Query: 204 LTLWTNFARYGNP 166
           +  W +F   G P
Sbjct: 493 IDFWVSFVNNGVP 505


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 177 YGNPTPKTDNLITAKWEPIAETGAACLVIDKE 82
           +G    + D+L TA        G +CLVID+E
Sbjct: 289 FGEKALQGDDLRTANIIADDPEGVSCLVIDRE 320


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -3

Query: 123 IAETGAACLVIDKELSMKYELYPERMKLFLEMYEKKF 13
           + ETG +  +ID+  +    +  E ++ ++E   KKF
Sbjct: 34  VGETGTSQKIIDEVYNGNVNVEDENVQSYVECMMKKF 70


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 117 ETGAACLVIDKELSMKYELYPERMKLFLEMYEKKF 13
           E G A  +ID     K  +  E + LF+E   KKF
Sbjct: 36  EIGTAQQIIDDINEGKINMDDENVLLFIECTMKKF 70


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 273 YILRCEALKDALSDTDKRVQEVLLTLWTNFARYGNP 166
           YI   + +K A    ++RV   +L +W   A  G+P
Sbjct: 285 YIAVTQPIKYAKHKNNRRVWLTILLVWAISAAIGSP 320


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 201 TLWTNFARYGNPTPKTDNLITAKW 130
           TLW    R G  TPK D   T  W
Sbjct: 443 TLWQRAHRLGIDTPKKDG-PTKSW 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,958
Number of Sequences: 438
Number of extensions: 4887
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)