Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15a13f
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 162 1e-40
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 162 1e-40
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 29 1.8
AF042400-1|AAC08951.1| 160|Caenorhabditis elegans FMRFamide-lik... 29 2.4
AF036702-6|AAB88376.1| 160|Caenorhabditis elegans Fmrf-like pep... 29 2.4
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 3.2
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 3.2
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 3.2
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 3.2
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 29 3.2
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 29 3.2
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 3.2
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 3.2
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 28 5.6
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 28 5.6
AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical ... 28 5.6
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 27 9.7
AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans nephrocystin-... 27 9.7
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 162 bits (394), Expect = 1e-40
Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Frame = +2
Query: 68 LHTXFFFYNQYFKMKLEKCLTEENINQNLLNIQYAVRGPILQRALQIERELVKGVPKRFE 247
L T FF M K L NIN N++ ++YAVRGPI+ RA+++E+EL G K F
Sbjct: 10 LVTSRFFGTSTRIMASGKTLNTSNINPNVIKMEYAVRGPIVIRAVELEKELATGAQKPFP 69
Query: 248 RVVRANCGDCHALGQKPITFIRQVLALVSFPELISSRLDIPQDVKDRAKELLDDCTKGSV 427
V++AN GD HA+GQKPITFIRQ+LA + PE++ + IP DV + A L C S
Sbjct: 70 NVIKANIGDAHAMGQKPITFIRQLLACIVNPEIMKTDKSIPSDVIEHANAFLGSCGGKSA 129
Query: 428 GSYSPSNGLNLVRSRVAQYITNRD-GVPSNPDDIYLGSGASDVIKSVLTLFV 580
G+YS S G+ +VR VA+YI RD G+P N +D+ L GAS+ I++VL LF+
Sbjct: 130 GAYSQSTGVEIVRKHVAEYIKRRDGGIPCNSEDVCLSGGASESIRNVLKLFI 181
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 162 bits (394), Expect = 1e-40
Identities = 81/172 (47%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
Frame = +2
Query: 68 LHTXFFFYNQYFKMKLEKCLTEENINQNLLNIQYAVRGPILQRALQIERELVKGVPKRFE 247
L T FF M K L NIN N++ ++YAVRGPI+ RA+++E+EL G K F
Sbjct: 10 LVTSRFFGTSTRIMASGKTLNTSNINPNVIKMEYAVRGPIVIRAVELEKELATGAQKPFP 69
Query: 248 RVVRANCGDCHALGQKPITFIRQVLALVSFPELISSRLDIPQDVKDRAKELLDDCTKGSV 427
V++AN GD HA+GQKPITFIRQ+LA + PE++ + IP DV + A L C S
Sbjct: 70 NVIKANIGDAHAMGQKPITFIRQLLACIVNPEIMKTDKSIPSDVIEHANAFLGSCGGKSA 129
Query: 428 GSYSPSNGLNLVRSRVAQYITNRD-GVPSNPDDIYLGSGASDVIKSVLTLFV 580
G+YS S G+ +VR VA+YI RD G+P N +D+ L GAS+ I++VL LF+
Sbjct: 130 GAYSQSTGVEIVRKHVAEYIKRRDGGIPCNSEDVCLSGGASESIRNVLKLFI 181
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 464 RSRVAQYITNRDGVPSNPDDIYLG 535
R ++ +Y+++ DG PS+ DD+ G
Sbjct: 306 RGKITKYVSDSDGAPSDEDDVDFG 329
>AF042400-1|AAC08951.1| 160|Caenorhabditis elegans FMRFamide-like
peptide 13 protein.
Length = 160
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 504 TPSLFVMYCATRDRTKLRPLDGEYDPTEPFVQ 409
T S+FV+ D +++R LD +YD PF Q
Sbjct: 7 TISMFVVAIQAFDSSEIRMLDEQYDTKNPFFQ 38
>AF036702-6|AAB88376.1| 160|Caenorhabditis elegans Fmrf-like
peptide protein 13 protein.
Length = 160
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 504 TPSLFVMYCATRDRTKLRPLDGEYDPTEPFVQ 409
T S+FV+ D +++R LD +YD PF Q
Sbjct: 7 TISMFVVAIQAFDSSEIRMLDEQYDTKNPFFQ 38
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 3.2
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Frame = +2
Query: 224 KGVPKRFERVVRANCGDCHALGQKPITFIRQVLA--LVSFPELISSRLDIPQDVKDRAKE 397
K + KR V+R NC DC T I ++ V+F L + ++++ Q V++ ++
Sbjct: 364 KEIVKRQTGVIRTNCLDCLDRTNAVQTAIGLQMSHDQVAFLNLNAGKVNVEQRVEEILRD 423
Query: 398 LL----DDCTK--GSVGSYSPSNGLNLVRSRVAQYITNR--DGVPSNPDDIYLGSGASD 550
L D C+ G+ + L +A+ I N DG D++L A D
Sbjct: 424 LWQKNGDQCSTIYAGTGALDGKSKLKDASRSLARTIQNNLMDGAKQESFDLFLTGAAYD 482
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 317 VLALVSFPELISSRLDIPQDVK-DRAKELLDDCTKGSVGSYSPSNGLNLVRSRVAQYITN 493
+++ VSF L I D+ D AKEL++ S Y+P GL + + + I N
Sbjct: 1040 IISFVSFDILPLIEFKIENDISFDEAKELIESEPPLSDDDYNPLRGL---KKGIKEIILN 1096
Query: 494 RDGV 505
R+ +
Sbjct: 1097 RESL 1100
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 317 VLALVSFPELISSRLDIPQDVK-DRAKELLDDCTKGSVGSYSPSNGLNLVRSRVAQYITN 493
+++ VSF L I D+ D AKEL++ S Y+P GL + + + I N
Sbjct: 1040 IISFVSFDILPLIEFKIENDISFDEAKELIESEPPLSDDDYNPLRGL---KKGIKEIILN 1096
Query: 494 RDGV 505
R+ +
Sbjct: 1097 RESL 1100
>AC024843-5|AAK70666.3| 740|Caenorhabditis elegans Hypothetical
protein Y61A9LA.8 protein.
Length = 740
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 433 VFSIQRSQLGAISCRTVHHEQRRCAFQP 516
V S Q++Q+G + + HH + RC F P
Sbjct: 481 VLSEQQNQMGGGAAKEDHHVKERCIFWP 508
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 363 ISLKT*RTEPKSYSTTARKVQWDRILHPTVSTWCDLVSHSTSRTE--TVCLPTLTIFT 530
+++++ +P T R V W + T+ T C+L T E TV LP + + T
Sbjct: 27 VAIQSVSGDPSKRDETIRMVHWMKEKLETIGTICELADLGTQELEGKTVKLPPVLLGT 84
>Z81579-5|CAB04654.3| 1305|Caenorhabditis elegans Hypothetical protein
R13H4.1 protein.
Length = 1305
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 488 TNRDGVPSNPDDIYLGSGASDVIKSVLT 571
+ DGVP + +Y SG V+ SVLT
Sbjct: 1132 SEHDGVPDDLLKVYTASGCMKVVDSVLT 1159
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 326 LVSFPELISSRLDIPQDVKDRAKELLDDCTKGSVGSYSPSNGLNLVRSRV 475
L SF E+ + P D K++ + ++ +KG N L +RS V
Sbjct: 22 LKSFEEVPKMEISSPSDFKEKLDQTIETLSKGQEDWNKRMNKLKQIRSMV 71
>AY959881-1|AAX56914.1| 1305|Caenorhabditis elegans
nephrocystin-4-like protein protein.
Length = 1305
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 488 TNRDGVPSNPDDIYLGSGASDVIKSVLT 571
+ DGVP + +Y SG V+ SVLT
Sbjct: 1132 SEHDGVPDDLLKVYTASGCMKVVDSVLT 1159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,851,930
Number of Sequences: 27780
Number of extensions: 253033
Number of successful extensions: 650
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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