Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14p24f
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0135 + 12188739-12189086,12189191-12189272,12189397-121895... 34 0.095
07_01_0573 + 4244719-4244767,4244833-4245239 33 0.13
03_06_0678 - 35480711-35484658 33 0.22
10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634 31 0.51
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 31 0.51
07_03_0572 - 19604643-19604745,19604947-19605629,19605786-196062... 31 0.51
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 31 0.51
08_01_0415 + 3687998-3688096,3688326-3688520,3689219-3689385,368... 31 0.67
05_01_0469 - 3725117-3725170,3725282-3725356,3726938-3727015,372... 31 0.67
12_01_1018 - 10386308-10386416,10386597-10386932,10387143-10387477 31 0.89
04_03_0904 + 20717005-20718087 30 1.5
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 29 2.0
08_02_1579 + 27997714-27998199,27998718-27998789,27999073-279991... 29 2.7
07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,779... 29 2.7
04_04_1125 + 31085106-31085714 29 2.7
04_03_0634 - 18211054-18212169,18213449-18214219 29 2.7
12_01_0401 + 3174256-3174326,3175138-3176822,3177049-3177269 29 3.6
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 28 4.7
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 28 6.2
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 28 6.2
08_01_1037 - 10536547-10536585,10536814-10537102,10537202-105373... 28 6.2
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 28 6.2
06_01_0715 - 5193648-5193897,5193987-5194255,5195011-5195350,519... 28 6.2
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 28 6.2
01_06_0154 - 27049218-27049517,27049679-27050107 27 8.2
>06_02_0135 +
12188739-12189086,12189191-12189272,12189397-12189527,
12189626-12189712,12189794-12189872,12190520-12190608,
12190765-12190806,12191030-12191149,12191819-12191968,
12192066-12192137,12192293-12192541
Length = 482
Score = 33.9 bits (74), Expect = 0.095
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Frame = +3
Query: 162 DPPSDVLSPADMAQLITVRLNKSDHQPLGFRLQGGKDFGTPLVVQKVNGGSAAERAGLQA 341
DP + ++SP + Q + + S Q +G + G LV+ + GG A +RAGL
Sbjct: 178 DPFTKIISPKEY-QSFRIGSDGSV-QGVGVFINKEPSSGRLLVMDCIEGGPA-DRAGLHG 234
Query: 342 GDALIRVNNTDVFTLRHQDAQDTIRA-AGANLELTVQRG 455
GD L+ ++ V L + A +R G +++ V G
Sbjct: 235 GDELVEIDGKSVSGLDGEAAAQRLRGRVGTTVKVKVLDG 273
>07_01_0573 + 4244719-4244767,4244833-4245239
Length = 151
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 167 GITPHSALSITSSKHGARPFPNWRSRSRDKFRAVIRHRARASVV 36
GI H+ L+ T + G RP+P W ++ D V+ AR S++
Sbjct: 93 GIHDHNLLAATMAGGGGRPWPGWIQQALDGCDQVVADLARVSIL 136
>03_06_0678 - 35480711-35484658
Length = 1315
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 176 VARGITPHSALSITSSKH-GARPFPNWRSRSRDKFRAVI 63
V G+TPH L + S H G+ P W ++ RD + V+
Sbjct: 745 VLEGLTPHEGLKVLSILHCGSSTCPTWMNKLRDMVKLVL 783
>10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634
Length = 219
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 393 QDAQDTIRAAGANLELTVQRGGGTWRPSVTPTGSLPRPGSRPLGGTPTP 539
+++ D + G +L V GGG PS P S+P P RP G P P
Sbjct: 75 EESDDDVDGGGESLSAIVY-GGGRLHPSRRP--SVPPPEERPRGWMPCP 120
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 462 TWRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPS 578
TW P+ TP S R R + TPTP N + P PS
Sbjct: 499 TWTPARTPVSSFQR--GRAVTMTPTPQNNPQRRPPPPPS 535
>07_03_0572 -
19604643-19604745,19604947-19605629,19605786-19606284,
19606370-19606878,19607110-19607148,19607347-19607411,
19609081-19609201,19610229-19610315,19611096-19611179,
19611925-19612175,19612869-19612962,19613043-19613284,
19614187-19614505
Length = 1031
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 249 FRLQGGKDFGTPLVVQKV-NGGSAAERAGLQAGDALIRVNNTDVFTLRHQDAQDTIRAAG 425
++ Q K+FG PL VQK+ N G + AG + + N T V L+ + A + G
Sbjct: 700 YKRQIAKEFGVPLFVQKILNSGDISLIAGASLSED--KSNGTGVSPLQLRTAAMALLRHG 757
Query: 426 ANLEL 440
+N+ L
Sbjct: 758 SNMPL 762
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 471 PSVTPTGSLPRPGSRPLGG-TPTPVTNTSLKANPQP 575
P+ TPT + P P P G TP+P TN +L+ +P P
Sbjct: 151 PAPTPTPTRPAPSPSPTGPPTPSP-TNPNLEPSPPP 185
>08_01_0415 +
3687998-3688096,3688326-3688520,3689219-3689385,
3689459-3689509,3689576-3689657,3689764-3689832,
3689939-3690109
Length = 277
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 237 QPLGFRLQGGKDFGTPLVVQKVNGGSAAERAGLQAGDALI 356
+PLG L G+ G +V+ V+ G A RAGL++GD ++
Sbjct: 81 KPLGLTL--GQKTGGGVVITAVDSGGNAARAGLKSGDQVL 118
>05_01_0469 -
3725117-3725170,3725282-3725356,3726938-3727015,
3727091-3727183,3727582-3727696,3728028-3728158,
3728243-3728512,3728983-3729120
Length = 317
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 285 LVVQKVNGGSAAERAGLQAGDALIRVNNTDVFT 383
L+V KV+ GS AER G++ GD + + T
Sbjct: 214 LIVAKVSNGSPAERNGIRMGDVIFHCQQESIST 246
>12_01_1018 - 10386308-10386416,10386597-10386932,10387143-10387477
Length = 259
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = +3
Query: 336 QAGDALIRVNNTDVFTLRHQDAQDTIRAAG---ANLELTVQRGGGTWRPSVTPTGSLPRP 506
Q GDAL NN V + Q+ + A L L G W ++ + R
Sbjct: 78 QQGDALAEQNNNPVVEQQEQNNNPVVEQQDDDQARLSLETLIGENRWEEALRRLERMVRD 137
Query: 507 GSRPLGGTPTPVTNTSLKANPQ 572
G G PT ++ +A+P+
Sbjct: 138 GEANNGPVPTAPSHDIYRAHPE 159
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 465 WRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPS 578
+ P+ TP P+P P TPTP T S K P+P+
Sbjct: 169 YTPTPTPPSYKPQPKPTPTPYTPTP-TPPSYKPQPKPT 205
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 465 WRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPS 578
+ P+ TP P+P P TPTP T S K P+P+
Sbjct: 189 YTPTPTPPSYKPQPKPTPTPYTPTP-TPPSYKPQPKPN 225
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 462 TWRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQPS 578
T+ P+ PT P P TPTP T T P+P+
Sbjct: 84 TYTPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPT 122
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 432 LELTVQRGGGTWRPSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQP 575
LE VQ GG+W+ S+T G R G RP G P + +++ P
Sbjct: 936 LEGLVQASGGSWQSSLTRRG---RYGGRPRGRKPRKNLSETIEEEEVP 980
>08_02_1579 +
27997714-27998199,27998718-27998789,27999073-27999120,
27999203-27999357,27999477-27999671,27999743-27999854,
27999955-28000024,28000110-28000168,28000251-28000374,
28000465-28000535,28001053-28001154,28001242-28001322,
28001504-28001662,28001757-28001807
Length = 594
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +3
Query: 273 FGTPLVVQKVNGGSAAERAGLQAGDALIRVNNTDVFTLRHQDAQDTIRAAGANLELTVQR 452
F T V ++ G+ LQ+ D LI + V +H DA +I N+ T+
Sbjct: 111 FNTVGVSDAISMGTRGMCYSLQSRD-LIADSIETVMGAQHYDANISIPGCDKNMPGTIMA 169
Query: 453 GGGTWRPSVTPTGSLPRPG 509
G RPS+ G +PG
Sbjct: 170 MGRLNRPSIMIYGGTIKPG 188
>07_01_0010 + 72162-74303,74470-74545,75971-76043,76496-76540,
77916-78116,78463-78541,78637-78678,78788-78847,
79087-80484,80777-80902,81037-81300
Length = 1501
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 28 HDRTTDARARCRITALNLSRERDRQ 102
H T + + RCR T L+ R RDRQ
Sbjct: 1259 HRETVEIKGRCRKTGLHRPRPRDRQ 1283
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 420 AGANLELTVQRGGGTWRPSVTPTGSLPRPGSRPLGGTPTPVTNTS 554
A L + TW S PT P P +P TPTP T T+
Sbjct: 14 AALALSAQLAPAAATWCGSNCPTTKPPPPPCQPPPPTPTPATPTT 58
>04_03_0634 - 18211054-18212169,18213449-18214219
Length = 628
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 471 PSVTPTGSLPRPGSRPLGGTPTPVTNTSLKANPQP 575
PS+ LP P S P G T T TS++A P+P
Sbjct: 3 PSMPQPLPLPSPPSSPRSGA-TTTTTTSVRARPRP 36
>12_01_0401 + 3174256-3174326,3175138-3176822,3177049-3177269
Length = 658
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 489 GSLPRPGSRPLGGTPTPVTNTSLKANPQP 575
G P+P GGTPTP+ A+P P
Sbjct: 170 GDAPQPRDANQGGTPTPMVKGGGAASPPP 198
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 288 VVQKVNGGSAAERAGLQAGDALIRVNNTDVFTLRHQDAQDTIR 416
+V V S A R G+ GD ++ N FTL + D +R
Sbjct: 641 IVDLVCDDSTAGRLGISRGDVIVSYNGLRDFTLHTLEIYDPVR 683
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 573 VVGSPSRMCSSPESEYLP-EDESRVSASCRSGSLMDAMYL 457
+VG P + SP+ E LP EDES CR + A+++
Sbjct: 345 LVGKPKQTRLSPDDEQLPDEDESISPKQCRRYMTIAAIFV 384
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 380 HPASPRRAGHHPR 418
HPA+PR HHPR
Sbjct: 8 HPAAPRAGAHHPR 20
>08_01_1037 -
10536547-10536585,10536814-10537102,10537202-10537327,
10537336-10538291,10538379-10538825,10538904-10539632
Length = 861
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = -1
Query: 217 RTVINCAMSAGDNTSLGGSLLTRHCQSPVQNTARDRFQIGDRAHEINLEL*YDTGRGRRS 38
+ +I ++A NT+ GG L R +P A+DR A +++L YDT G
Sbjct: 474 KDLIEIRVTARPNTAPGGRLPKRPTPAPSAPPAQDR-----HAQSYDVQLQYDTDFGE-- 526
Query: 37 FDRGEAAS 14
DR EA S
Sbjct: 527 -DRTEADS 533
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 447 QRGGGTWRPSVTPTGSLPRPGSRPLGG 527
QRG GT PSV+P +P P S G
Sbjct: 3 QRGDGTDGPSVSPPERVPTPSSSRYAG 29
>06_01_0715 -
5193648-5193897,5193987-5194255,5195011-5195350,
5195691-5195845,5196547-5196557,5197632-5197689,
5197855-5198004,5198074-5198169,5198398-5198818,
5198835-5198950,5199041-5199149,5199483-5199532,
5200936-5201004,5201366-5201459,5201550-5201820,
5202273-5202607,5202718-5202786,5202834-5202904
Length = 977
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 408 TIRAAGANLELTVQRGGGTWRPSVTPTGSLPRPGSRPL 521
++ GA L+ + + GG S P G+L PG+ PL
Sbjct: 712 SVSRVGAGLDGSAKGAGGGGSSSSLPVGTLALPGAPPL 749
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 285 LVVQKVNGGSAAERAGLQAGDAL 353
L+V++V+ GS AER G++ GD +
Sbjct: 409 LIVEEVSIGSCAERLGVRVGDII 431
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -2
Query: 582 CATVVGSPSRMCSSPESEYLPEDESRVSASCRSGSLMDAMYLPRVE 445
C +G+PS + LP D+S + SC M PR E
Sbjct: 63 CTLSLGTPSTRRAEAAVAGLPWDQSSLQPSCNGRQEMSGAAAPRTE 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,105,412
Number of Sequences: 37544
Number of extensions: 413397
Number of successful extensions: 1438
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1431
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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