Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14p23f
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 62 5e-11
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 54 2e-08
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 50 2e-07
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 49 4e-07
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 1e-05
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 4e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 38 0.001
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 35 0.007
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 31 0.085
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 31 0.11
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 30 0.20
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 29 0.46
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 27 1.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 1.8
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 2.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.4
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 26 3.2
SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit Gsa1... 26 3.2
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 4.2
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 4.2
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 26 4.2
SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 25 7.4
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 25 7.4
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 7.4
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 9.8
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 25 9.8
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 62.1 bits (144), Expect = 5e-11
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 224
K + ITGA++GIG+S + + + + + EL SKY + DV
Sbjct: 7 KTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDV 66
Query: 225 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAI---- 392
+D + G++ ++ +E IDV+INNA L + + I+ VT + T+ L +
Sbjct: 67 SDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTR 126
Query: 393 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
++ G ++NV S+A +Y +TKSA+ QF++ +
Sbjct: 127 AVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFTSAL 172
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 53.6 bits (123), Expect = 2e-08
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Frame = +3
Query: 51 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTD 230
V ITG++ G+G ++V++ L +G IA A ++ E +K + DVTD
Sbjct: 8 VLITGSSKGLGYALVKVGLAQGYNVIA----CSRAPDTITIE-----HSKLLKLKLDVTD 58
Query: 231 EEHFLGILNAVVQEQGGIDVVINNAA--LMND----SIGIYKKAIEVNVTALITSTLKAI 392
+ + G +D+VINNA L+ + +I + + VN + T +A+
Sbjct: 59 VKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEAL 118
Query: 393 EIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGR 536
+M GKGG ++ +SSVA S + +Y A+K AV S I R
Sbjct: 119 NLM--RESGKGGRILQISSVAGYYPSPCLSMYNASKFAVEGLSQTIMR 164
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 50.0 bits (114), Expect = 2e-07
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Frame = +3
Query: 39 KDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 218
K K ITG + GIG S+ + G ++ +L + AEL K+G + K Y
Sbjct: 8 KGKTTLITGGSGGIGFSIAKAFAAAG-SNVGLLYGRNKKALEYAAELRDKHGVQAKAYSC 66
Query: 219 DVTDEEHFLGILNAVVQEQGG-IDVVINNAALMNDSIGIYKKAIEV--NVTAL-ITSTLK 386
+ + + N V+E GG +DV+I NA + + + K ++ V + +
Sbjct: 67 PIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYY 126
Query: 387 AIEIMGKH--SGGKGGTVINVSSVAALTQ-SHVMPIYFATKSAVLQFSNCI 530
+ G H GKG + S + Y ATK+AV + +
Sbjct: 127 TAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARAL 177
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 49.2 bits (112), Expect = 4e-07
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 4/140 (2%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDV 224
+VV ITGAA GIG+ + ++ + G + +A +DI + SK + ++DV
Sbjct: 6 RVVLITGAAGGIGKVLCKMFTELGDR-VAGIDIVDP----------SKVQDAALALQADV 54
Query: 225 TDEEHFLGILNAVVQEQGGIDVVINNAALMNDS--IGIYKKAIEVNVTALITSTLKAIEI 398
+ + + V+Q G IDV+INNA L +D+ + ++ + +V+ ++
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRY 114
Query: 399 MGKHSG--GKGGTVINVSSV 452
+ H GKGG+++N+ SV
Sbjct: 115 VIPHMAKQGKGGSIVNIGSV 134
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 44.0 bits (99), Expect = 1e-05
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGN-KTKFYRSD 221
KV +TG++ GIG L +G K + + EE Q + +++ + + K +F R D
Sbjct: 43 KVALVTGSSGGIGYVTALELARKGAK-VYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 222 VTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNV 359
+ D E + + ++ + +++NNA +MN + K E+ +
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQI 147
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 39.1 bits (87), Expect = 4e-04
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Frame = +3
Query: 42 DKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQS-LQAELNSKYGNKTKFYRS 218
+K +TG +GIG++ + EG + I + EE + + +L + G +
Sbjct: 42 EKKTLLTGGDSGIGKAAAVMFAREG-SDLVISCLPEERDDAEVTRDLIEREGRNCWIWEG 100
Query: 219 DVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGI-------YKKAIEVNVTALITS 377
+ ++ +++ +++ G IDV++NN A + I + + N+ +
Sbjct: 101 KLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWV 160
Query: 378 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFS 521
T AI M G +++N SS+ A + Y +TK A+ F+
Sbjct: 161 TKAAISHM-----KSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFT 203
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 37.5 bits (83), Expect = 0.001
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Frame = +3
Query: 33 EWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKY----GNK 200
E +KV+ +TG++ GIG + L + K IA+ ++L + + G+
Sbjct: 3 ETAEKVILLTGSSKGIGLATAE-ALQKKAKVIAVSRSLTPELETLLIQNPDSFVHVKGDV 61
Query: 201 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALITST 380
T+ ++ + G L++V+ G ++ + A + + I ++K ++N +++ +
Sbjct: 62 TEVGKASIETAIKKFGKLDSVILNAGVLEPI---AKIADADINEWRKLFDINFFSVVETV 118
Query: 381 LKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCIGRPE 542
AI + K GT++ VSS AA+ Y +K+A+ +G E
Sbjct: 119 KYAIPHLRKTK----GTIVIVSSGAAVRVFPAWAAYCCSKAAINMLVMNLGSEE 168
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 35.1 bits (77), Expect = 0.007
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Frame = +3
Query: 42 DKVVFITGAATG-IGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRS 218
+K V ITG + G IG ++ EG + +A E +A L + +
Sbjct: 4 EKFVLITGCSEGGIGNALALKFHQEGFQVLATARQVERMDNLTKAGLQT--------LKL 55
Query: 219 DVTDEEHFLGILNAVVQ-EQGGIDVVINNAALMNDSIGI------YKKAIEVNVTALITS 377
DVTDE+ + V + G + +INNA + I K ++VN +I
Sbjct: 56 DVTDEDSVREVEQEVRKFTNGSLHYLINNAGAPCSAPAIDLDIEDVSKVMDVNFYGVIRM 115
Query: 378 TLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
KA + + G T++NV+S+ + Y A+K+A+L +SN +
Sbjct: 116 N-KAFQHQLIRAKG---TIVNVNSLVSYVPFAFNAAYNASKAALLAYSNTL 162
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 31.5 bits (68), Expect = 0.085
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +3
Query: 21 KMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNK 200
K S+ ++ ITG + +G ++++ LD G +A LD E A LQ Y +K
Sbjct: 28 KQSYSCAKGLIVITGGSGILGHAIIQEALDRGFS-VASLDSTEPA-SFLQ------YNSK 79
Query: 201 TKFYRSDVTDEEHFLGILNAVVQEQGGIDVVINNAAL--MNDSIGI----YKKAIEVNVT 362
+ ++T ++ G ++++ + +IN AA+ N + I +K E NV
Sbjct: 80 FSALKCNITKDKDVEGCVHSLKKMNRTPFALINAAAIAPKNHLLSISRQELQKCFETNVI 139
Query: 363 ALITSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVL 512
+ T ++ + V+N++S A + + Y ++K+A++
Sbjct: 140 GQLAITSALFPLLLQDPNPH---VVNIASSLAYFSAMGVGAYSSSKAALV 186
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 31.1 bits (67), Expect = 0.11
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 51 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKY 191
+F+TGAA IG +VR LL+ G + + ++ +EE L+A + Y
Sbjct: 3 IFVTGAAGFIGSEIVRQLLEAGHEVVGLVR-SEENAAKLRAAGGTPY 48
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 30.3 bits (65), Expect = 0.20
Identities = 33/167 (19%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Frame = +3
Query: 51 VFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQAELNSKYGNKTKFYRSDVTD 230
V ITG ++G+G+ + +I +G + I L+ L S K + + + D
Sbjct: 4 VLITGGSSGLGKRIAQIWSQKGHQ----CHIVGRNEFHLKETLQSLSVAKGQQHTLTIAD 59
Query: 231 EEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVN-------VTALITSTLKA 389
+ + L ++ E ID V++ A ++ S+ + E++ V+A+ S +
Sbjct: 60 VQSDMKNLKSIF-ESVEIDTVVHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKMAI 118
Query: 390 IEIMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
+E + + ++N+SS + +Y A+K+ + F+ +
Sbjct: 119 LEWFRNKNSERDRLILNISSRLSTYALPGTSVYAASKAGLESFTKVL 165
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 29.1 bits (62), Expect = 0.46
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 9/148 (6%)
Frame = +3
Query: 45 KVVFITGAATGIGESVVRILL--DEGVKHIAILDI-AEEAGQSLQAELNSKYGNKTKFYR 215
K VF+TGA +G ++R L+ +K IA++ +EE G + + YG + +
Sbjct: 1005 KTVFLTGANGYLGVFILRDLMTRSSNLKVIALVRASSEEHGLKRLKDSCTAYGVWDESWA 1064
Query: 216 SDVTDEEHFLGILNAVVQEQGG------IDVVINNAALMNDSIGIYKKAIEVNVTALITS 377
++ L + N ++E+ +D VI+N AL++ + Y K NV IT+
Sbjct: 1065 QKISVVNGDLALENWGIEERKWNKLTEVVDYVIHNGALVH-WVYPYSKLRGPNVMGTITA 1123
Query: 378 TLKAIEIMGKHSGGKGGTVINVSSVAAL 461
LK + GKG ++ VSS + +
Sbjct: 1124 -LKLCSL------GKGKSLSFVSSTSTV 1144
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 48 VVFITGAATGIGESVVRILLDEGVKHIAIL 137
VV +TG ++GIG+ VV L G + + +L
Sbjct: 77 VVMVTGGSSGIGQVVVEKLASLGAQVVILL 106
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 228 DEEHFLGILNAVVQEQGGIDVVINNAALMNDSIGIYKKA 344
+ EH L L+ +D +NN + +S+ I+KKA
Sbjct: 1139 ESEHLLNELDDTHSSLSTVDFTVNNTESLINSLKIFKKA 1177
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Frame = -1
Query: 551 RKVFRSTDTITELQHSAFSCEVYWHNVRLRQ--------SGNRRN-VDNCTSFTTAV 408
R R++ T+TE Q+ + + W+ LRQ +G+ ++ +D C FT A+
Sbjct: 164 RLQLRTSQTMTEPQYDSMHTQFMWNEFMLRQLIKFRSHLNGDEKSALDGCRFFTCAI 220
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 36 WKDKVVFITGAATGIGESVVRILLDEGVKHIAILDI 143
+K V + GA GIG +++ LL GVK + I+D+
Sbjct: 23 FKSAKVLLVGAG-GIGCELLKNLLMSGVKEVHIIDL 57
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 30 HEWKDKVVFITGAATGIGESVVRILLDEGVKHIAILDIAEEAGQSLQ-AELN 182
H ++DK+V G TGI + G KH+ +D++E +++Q E+N
Sbjct: 51 HLFRDKIVLDVGCGTGI---LSMFCARAGAKHVYGVDMSEIIHKAVQIVEVN 99
>SPAC3F10.04 |gsa1|gsh2|glutathione synthetase large subunit
Gsa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 6/98 (6%)
Frame = +3
Query: 210 YRSD--VTDEEHFLGI----LNAVVQEQGGIDVVINNAALMNDSIGIYKKAIEVNVTALI 371
+RSD V ++ F+G N + GG+ ++N G+Y+K + N +
Sbjct: 127 FRSDYMVHQDDSFIGCKQVEFNTISVSFGGVSKAVSNLHAYCSQSGLYRKPLTTNYLTVN 186
Query: 372 TSTLKAIEIMGKHSGGKGGTVINVSSVAALTQSHVMPI 485
TS + V N++S + + PI
Sbjct: 187 TSVSGICTGISNAVDAYRDYVKNITSKMNIASDNTKPI 224
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 4.2
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +3
Query: 228 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 392
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 393 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
+ I G +INVSS+ + +Y+ TK A+ S +
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 121 LTPSSNNILTTDSPMPVAAPV 59
+T + N+ TTDSPM A PV
Sbjct: 447 ITKDNLNLTTTDSPMSEAEPV 467
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 4.2
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
Frame = +3
Query: 228 DEEHFLGILNAV---VQEQGGIDVVINNA--ALMNDSIGIYKKAIEVNVTALITSTLKAI 392
D +F I +V + G IDV++NNA ++ + ++ I + L+ I
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVI 81
Query: 393 E-IMGKHSGGKGGTVINVSSVAALTQSHVMPIYFATKSAVLQFSNCI 530
+ I G +INVSS+ + +Y+ TK A+ S +
Sbjct: 82 KAITPIFRSQHNGMIINVSSIGGKMTFPLGCLYYGTKYAIEGISEAL 128
>SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit
Cgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 412
Score = 25.0 bits (52), Expect = 7.4
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Frame = +3
Query: 228 DEEHFLGILNAVVQE---QGGIDVVINNAA------LMNDSIGIYKKAIEVNVT 362
DEEH+ +LNA+ ++ + G+ V++ A + +YK+ E+N+T
Sbjct: 148 DEEHYNEVLNAMTEKRIGEAGVAVIVQGAVGDYFYIVEQGEFDVYKRP-ELNIT 200
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 3 LIYGTLKMSHEWKDKVVFITGAATGIGESVVRILLDEGVKHIA 131
LI+G L S + D +TG G G + I E V A
Sbjct: 185 LIFGNLLTSSNYDDNQKKVTGGRNGYGAKLCNIFSTEFVVETA 227
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 115 PSSNNILTTDSPMPVAAPVI 56
PSSNN T +P+P AAP++
Sbjct: 257 PSSNNQEVTSAPIP-AAPIV 275
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 180 NSKYGNKTKFYRSDVTDEEHFLGILNAV 263
N+ G K+ ++ SDV +HF +L+A+
Sbjct: 150 NAVIGWKSIYHASDVDVHDHFANVLSAL 177
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +3
Query: 285 DVVINNAALMNDSIGIYKKAIEVNVTALITSTLKAIE 395
DV + +++ND I I+ + E+N++ ++ +E
Sbjct: 381 DVALKVPSVINDCISIFLEIYELNISYMVQEVTVVME 417
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,214,406
Number of Sequences: 5004
Number of extensions: 43656
Number of successful extensions: 168
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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