Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14o20f
(646 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0545 + 18470313-18470669,18470901-18471095,18471183-184713... 31 0.59
09_04_0583 - 18699265-18699459,18701579-18701827,18703283-187036... 31 0.78
08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548... 29 2.4
07_01_0794 - 6179424-6179714,6179797-6179844,6180189-6180248,618... 29 2.4
02_01_0228 + 1507314-1507566,1507645-1507913,1508010-1508213,150... 29 2.4
07_01_0715 + 5463705-5463853,5463934-5464287,5464849-5464932,546... 29 3.2
07_01_0712 - 5381641-5381667,5382107-5382261,5382917-5383006,538... 29 3.2
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 29 3.2
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 29 4.2
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 29 4.2
11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103 28 5.5
03_02_0044 - 5245204-5245538,5245946-5246093,5246182-5247395,524... 28 5.5
12_01_0754 - 6816789-6816886,6816922-6817722,6818377-6819058 28 7.3
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 28 7.3
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 27 9.7
05_06_0039 + 25113409-25113522,25113827-25113915,25114013-251141... 27 9.7
>08_02_0545 +
18470313-18470669,18470901-18471095,18471183-18471362,
18471462-18471656,18472081-18472179,18472271-18472780,
18472896-18473225
Length = 621
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 348 QKSRKEISEKNKEAYIQAMEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTETDA 527
+K++ + K K+A QAM+ E + + L ++ + T GG ++ E+DA
Sbjct: 479 EKNKLALERKKKQAEKQAMKAAARAEKEAEKKLKEKEKKARKRSATAGGAESEEAAESDA 538
Query: 528 KVLSIIKEQTEP 563
K ++ EP
Sbjct: 539 KSDEAEAQEEEP 550
>09_04_0583 -
18699265-18699459,18701579-18701827,18703283-18703669,
18703793-18703870,18704082-18704141,18704299-18704343,
18704506-18704718,18704867-18704932
Length = 430
Score = 31.1 bits (67), Expect = 0.78
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +3
Query: 261 ITITSKYNSSCSSGPRDVDQLKALYDNMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTR 440
+T + S+G RD L+ L N ++ +RK S K+AYIQ +E + A + +
Sbjct: 90 VTAKKDHRRGVSTGERDPKTLRRLAQN-REAARK--SRLRKKAYIQQLESSRIRLAQLEQ 146
Query: 441 ALINIKEDKIEMKKTGG 491
L + + +GG
Sbjct: 147 ELHTARAQGVFFPGSGG 163
>08_02_0431 +
17053928-17054189,17054296-17054564,17054661-17054864,
17054974-17055066,17055160-17055255,17055339-17055683,
17055935-17056018,17056106-17056171,17056268-17056333,
17056436-17056501,17056635-17056700,17056798-17056863,
17056981-17057028,17057107-17057169,17057255-17057320,
17057483-17057542,17057888-17057935,17058019-17058255,
17058346-17058366
Length = 741
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 243 KKKEVWITITSKYNSSCSSGPRDV--DQLKALYDNMKQKSRKEISEKNKE 386
K K+++ + ++C++ P V DQ AL ++ + K ISE+NK+
Sbjct: 204 KLKDLYFDVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKK 253
>07_01_0794 -
6179424-6179714,6179797-6179844,6180189-6180248,
6180411-6180476,6180562-6180624,6180703-6180750,
6180868-6180933,6181031-6181096,6181230-6181295,
6181510-6181575,6181663-6181746,6181839-6181907,
6181998-6182342,6182426-6182521,6182615-6182707,
6182817-6183020,6183117-6183385,6183492-6183753
Length = 753
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 243 KKKEVWITITSKYNSSCSSGPRDV--DQLKALYDNMKQKSRKEISEKNKE 386
K K+++ + ++C++ P V DQ AL ++ + K ISE+NK+
Sbjct: 204 KLKDLYFDVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKK 253
>02_01_0228 +
1507314-1507566,1507645-1507913,1508010-1508213,
1508323-1508415,1508509-1508604,1508688-1509032,
1509123-1509191,1509284-1509367,1509455-1509520,
1509735-1509800,1509934-1509999,1510097-1510162,
1510280-1510327,1510406-1510468,1510554-1510619,
1510782-1510841,1511185-1511232,1511315-1511605
Length = 750
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 243 KKKEVWITITSKYNSSCSSGPRDV--DQLKALYDNMKQKSRKEISEKNKE 386
K K+++ + ++C++ P V DQ AL ++ + K ISE+NK+
Sbjct: 201 KLKDLYFDVNETKEANCNNVPEGVLSDQWIALVNHWMNEKSKRISEQNKK 250
>07_01_0715 +
5463705-5463853,5463934-5464287,5464849-5464932,
5465170-5465270,5465603-5465665,5466198-5466287,
5466390-5466479,5467135-5467289,5467729-5467755
Length = 370
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 117 SQKQVRKRGANYTQEEKTLLLDLIM--QYKDIVESKRTGGIIIQKKKEVW 260
S Q R+RG++ ++E +TLLL L M + D+V + G K + ++
Sbjct: 90 STGQRRRRGSHLSEEAQTLLLFLHMHKSFADVVAGNKAGAAWSDKHRRLY 139
>07_01_0712 -
5381641-5381667,5382107-5382261,5382917-5383006,
5383109-5383198,5383731-5383793,5384126-5384226,
5384464-5384547,5385109-5385462,5385543-5385691
Length = 370
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +3
Query: 117 SQKQVRKRGANYTQEEKTLLLDLIM--QYKDIVESKRTGGIIIQKKKEVW 260
S Q R+RG++ ++E +TLLL L M + D+V + G K + ++
Sbjct: 90 STGQRRRRGSHLSEEAQTLLLFLHMHKSFADVVAGNKAGAAWSDKHRRLY 139
>04_04_0827 - 28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 29.1 bits (62), Expect = 3.2
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = +3
Query: 264 TITSKYNSSCSSGPRDVDQLKALYDNMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTRA 443
++T+ + C +D+ + + M +S + S K + + ++ + + A +T
Sbjct: 738 SVTNPCEAYCGRSTSSLDEFE-VRSAMAVQSNAQAS-KQFDCSSKLLQSKTTSHAYLTSP 795
Query: 444 LINIKEDKIEMKKTGGGFWKPKSTETDAKVLSIIKEQTEPLHNPYDSAADFF 599
+ + +GG FW KS E AK + I + T P D A D F
Sbjct: 796 GDISAQTNLLENPSGGAFW-EKSLEYTAKSMEIAGDTTSSSDMPLDIAIDNF 846
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 28.7 bits (61), Expect = 4.2
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +3
Query: 273 SKYNSSCSSGPRDVDQLK--ALYDNMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTRAL 446
S+ S+ S R VD +K + + ++ K ++N + + + ++
Sbjct: 218 SQSRSTNDSTTRGVDSMKHASKEEPVESKPNSTRGQENMDVLNNLNSTDAGNNSSLSTTT 277
Query: 447 INIKEDKIEMKKTGGGFWKPKSTETDAKVLSIIK----EQTEPLHNPYDSAADFFNDVVE 614
N + + +T + S+ETDA K E +EPL D++ + F DV +
Sbjct: 278 ENASHVQRRLLQTDEKSNQAGSSETDASDTGTAKAATVENSEPLEADADASFNLFRDVED 337
Query: 615 IP 620
+P
Sbjct: 338 LP 339
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 237 IQKKKEVWITITSKYNSSCSSGPRDVDQLKALYDNMKQKSRKEISEKNKEAYIQAME 407
+QK+KEV + K + + RD+D L L ++K+ R+E +++ I E
Sbjct: 659 LQKEKEVLVEDRQKLETDKADIRRDIDSLNTLSKSLKE--RREAYNRDRNNLIDIFE 713
>11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103
Length = 404
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 240 QKKKEVWITITSKYNSSCSSG-PRDVDQLKALYDNMKQKSRKEISEKN 380
+K + W+ +T+ YNS+ S R+ +QLK ++ +K K +SE N
Sbjct: 186 KKSYQYWLDVTATYNSTTKSNRMRNRNQLKQRWERIK----KPVSEFN 229
>03_02_0044 -
5245204-5245538,5245946-5246093,5246182-5247395,
5247730-5248003,5248141-5248293
Length = 707
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 192 QYKDIVESKRTGGIIIQKKKEVW 260
Q+K VES R+ IIQ KKE+W
Sbjct: 518 QFKSAVESFRSLLAIIQAKKEIW 540
>12_01_0754 - 6816789-6816886,6816922-6817722,6818377-6819058
Length = 526
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3
Query: 264 TITSKYNSSCSSGPRDVDQLKALYDNMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTRA 443
+ITS+YN C+ R D K K+ K+I +K AY + + E + R
Sbjct: 415 SITSRYNVLCADAIRCAD--KGSASKAVYKAAKDILQK---AYEEIIAYERNPGRGLQRD 469
Query: 444 LINIKED 464
INI ED
Sbjct: 470 AININED 476
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 27.9 bits (59), Expect = 7.3
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +3
Query: 105 LNKMSQKQVRK-RGANYTQEEKTLLLDLIMQYKDIVESKRTGGII---IQKKKEVWITIT 272
L+ + QKQ R + AN +K L ++ + ++ +++ G++ IQK K+ +
Sbjct: 368 LSILYQKQGRATQFANKAARDKWLQKEIDDLERVLLSNRKQEGLLQEEIQKLKDEINNLN 427
Query: 273 SKYNSSCSSGPRDVDQLKALYD--NMKQKSRKEISEKNKEAYIQAMEMEVVTEADVTRAL 446
S S S + L ++ N +K R E+ E+ K + + EADVT +
Sbjct: 428 SYIESRKSESSKLESALAKKHNDYNDLRKQRDELQEERKSFWKE--------EADVTAEI 479
Query: 447 INIKEDKIEMKKT 485
+K+D ++ +K+
Sbjct: 480 DRLKDDLVKAQKS 492
>08_02_0270 +
15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -3
Query: 260 PNLLFLLDNNATCSFTFHN---IFILHDEIQQQCFFLLSVICSTFSNLFLRHFV*IIKIL 90
PN L NNATC +H +LH + + + I + FS H+ K L
Sbjct: 321 PNAKVFLCNNATCGHFYHPRCVAQLLHPNSRNEASEMEKKIMAGFSFTCPVHWCFHCKGL 380
Query: 89 NQNMQRKKSPRT*CKRCDQSNH 24
Q C+RC +S H
Sbjct: 381 EDRTQEPLQFAV-CRRCPRSYH 401
>05_06_0039 +
25113409-25113522,25113827-25113915,25114013-25114148,
25114231-25114305,25114456-25114577,25114680-25114755,
25115242-25115301,25115383-25115511
Length = 266
Score = 27.5 bits (58), Expect = 9.7
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -3
Query: 218 FTFHNIFILHDEIQQQCFFLLSVICSTFSNLFLRHFV*IIKIL 90
+ F+ IF+ +D+I+Q F ++C + LF+ + + KIL
Sbjct: 213 YLFYQIFLHYDQIKQMETFGYLLVCVVPAILFVMNMIWFSKIL 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,432
Number of Sequences: 37544
Number of extensions: 287584
Number of successful extensions: 753
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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