Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14o20f
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008993-1|AAH08993.1| 275|Homo sapiens chromosome 9 open readi... 60 9e-09
AY598327-1|AAT06738.1| 275|Homo sapiens L8 protein. 60 9e-09
AL353805-6|CAI12542.1| 275|Homo sapiens chromosome 9 open readi... 60 9e-09
AL353805-5|CAI12541.1| 181|Homo sapiens chromosome 9 open readi... 60 9e-09
AL353805-4|CAI12540.1| 159|Homo sapiens chromosome 9 open readi... 60 9e-09
AL353805-3|CAI12539.1| 134|Homo sapiens chromosome 9 open readi... 60 9e-09
BC112309-1|AAI12310.1| 874|Homo sapiens G protein-coupled recep... 34 0.38
BC112307-1|AAI12308.1| 874|Homo sapiens G protein-coupled recep... 34 0.38
AY532280-1|AAS37682.1| 874|Homo sapiens G protein coupled recep... 34 0.38
X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein. 32 1.5
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 32 1.5
U63809-1|AAC24947.1| 342|Homo sapiens prostate apoptosis respon... 30 6.1
DQ451401-1|ABD96829.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 30 8.1
BT006908-1|AAP35554.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 30 8.1
BC071563-1|AAH71563.1| 451|Homo sapiens C1orf55 protein protein. 30 8.1
BC037857-1|AAH37857.1| 282|Homo sapiens RAD1 protein protein. 30 8.1
BC009804-1|AAH09804.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 30 8.1
BC006837-1|AAH06837.1| 282|Homo sapiens RAD1 homolog (S. pombe)... 30 8.1
AL133288-2|CAI22306.1| 451|Homo sapiens chromosome 1 open readi... 30 8.1
AL133288-1|CAI22305.1| 356|Homo sapiens chromosome 1 open readi... 30 8.1
AK127780-1|BAC87130.1| 439|Homo sapiens protein ( Homo sapiens ... 30 8.1
AK092701-1|BAC03952.1| 356|Homo sapiens protein ( Homo sapiens ... 30 8.1
AJ004974-1|CAA06248.1| 282|Homo sapiens cell cycle checkpoint p... 30 8.1
AF084512-1|AAC35549.1| 282|Homo sapiens DNA repair exonuclease ... 30 8.1
AF076841-1|AAC95523.1| 282|Homo sapiens Rad1-like protein protein. 30 8.1
AF074717-1|AAC98093.1| 282|Homo sapiens Rad1-like DNA damage ch... 30 8.1
AF073524-1|AAC95466.1| 282|Homo sapiens RAD1 protein. 30 8.1
AF058392-1|AAC14138.1| 282|Homo sapiens cell cycle checkpoint p... 30 8.1
AF030933-1|AAC95427.1| 282|Homo sapiens exonuclease homolog RAD... 30 8.1
AF011905-1|AAC27243.1| 282|Homo sapiens HRAD1 protein. 30 8.1
>BC008993-1|AAH08993.1| 275|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 275
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>AY598327-1|AAT06738.1| 275|Homo sapiens L8 protein.
Length = 275
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>AL353805-6|CAI12542.1| 275|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 275
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>AL353805-5|CAI12541.1| 181|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 181
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>AL353805-4|CAI12540.1| 159|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 159
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>AL353805-3|CAI12539.1| 134|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 134
Score = 59.7 bits (138), Expect = 9e-09
Identities = 27/91 (29%), Positives = 53/91 (58%)
Frame = +3
Query: 114 MSQKQVRKRGANYTQEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSC 293
M ++ K +++ EK++LL L+ +YK ++E K++ I K+ W + +YNS
Sbjct: 1 MQNNEIIKPAKYFSELEKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQP 60
Query: 294 SSGPRDVDQLKALYDNMKQKSRKEISEKNKE 386
S RD QLK ++N+K +++K ++ + +E
Sbjct: 61 SVSLRDFKQLKKCWENIKARTKKIMAHERRE 91
>BC112309-1|AAI12310.1| 874|Homo sapiens G protein-coupled receptor
133 protein.
Length = 874
Score = 34.3 bits (75), Expect = 0.38
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 201 DIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGP 305
DIVE K GI ++++K V + +YNSSC S P
Sbjct: 63 DIVEGKVNKGIYLKEEKGVTLLYYGRYNSSCISKP 97
>BC112307-1|AAI12308.1| 874|Homo sapiens G protein-coupled receptor
133 protein.
Length = 874
Score = 34.3 bits (75), Expect = 0.38
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 201 DIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGP 305
DIVE K GI ++++K V + +YNSSC S P
Sbjct: 63 DIVEGKVNKGIYLKEEKGVTLLYYGRYNSSCISKP 97
>AY532280-1|AAS37682.1| 874|Homo sapiens G protein coupled receptor
133 protein.
Length = 874
Score = 34.3 bits (75), Expect = 0.38
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 201 DIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGP 305
DIVE K GI ++++K V + +YNSSC S P
Sbjct: 63 DIVEGKVNKGIYLKEEKGVTLLYYGRYNSSCISKP 97
>X78998-1|CAA55632.1| 1411|Homo sapiens endosomal protein protein.
Length = 1411
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 156 QEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGPRDVDQLKALY 335
Q+ K++ L + +D++ ++ G + +E+ + S + ++ KAL
Sbjct: 1047 QDLKSVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQ 1106
Query: 336 DNMKQKSRKE---ISEKNKEAYIQAMEMEVVTEADVTRALINIKEDKIEMKK 482
D K+KS KE ++EK+K A I+ E++ E ++T+ +K K+E K
Sbjct: 1107 DIQKEKSLKEKELVNEKSKLAEIE--EIKCRQEKEITKLNEELKSHKLESIK 1156
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 32.3 bits (70), Expect = 1.5
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 156 QEEKTLLLDLIMQYKDIVESKRTGGIIIQKKKEVWITITSKYNSSCSSGPRDVDQLKALY 335
Q+ K++ L + +D++ ++ G + +E+ + S + ++ KAL
Sbjct: 1047 QDLKSVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQ 1106
Query: 336 DNMKQKSRKE---ISEKNKEAYIQAMEMEVVTEADVTRALINIKEDKIEMKK 482
D K+KS KE ++EK+K A I+ E++ E ++T+ +K K+E K
Sbjct: 1107 DIQKEKSLKEKELVNEKSKLAEIE--EIKCRQEKEITKLNEELKSHKLESIK 1156
>U63809-1|AAC24947.1| 342|Homo sapiens prostate apoptosis response
protein par-4 protein.
Length = 342
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Frame = +3
Query: 264 TITSKYNSSCSSGPRDVDQLKAL--------YDNMKQKSRKEISEKNKEAYIQAMEMEVV 419
T++ +Y S+ S DV + Y+ S +S E I+ +E EVV
Sbjct: 223 TVSGRYKSTTSVSEEDVSSRYSRTDRSGFPRYNRDANVSGTLVSSSTLEKKIEDLEKEVV 282
Query: 420 TEADVTRALINIKEDKIEM 476
TE L+ + +DK EM
Sbjct: 283 TERQENLRLVRLMQDKEEM 301
>DQ451401-1|ABD96829.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>BT006908-1|AAP35554.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>BC071563-1|AAH71563.1| 451|Homo sapiens C1orf55 protein protein.
Length = 451
Score = 29.9 bits (64), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 402 MEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTE--TDA-KVLSIIKEQTE 560
ME +VTE + T+ ++ IE + TG G K K TE TD +V + E+ E
Sbjct: 308 MESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
>BC037857-1|AAH37857.1| 282|Homo sapiens RAD1 protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>BC009804-1|AAH09804.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>BC006837-1|AAH06837.1| 282|Homo sapiens RAD1 homolog (S. pombe)
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AL133288-2|CAI22306.1| 451|Homo sapiens chromosome 1 open reading
frame 55 protein.
Length = 451
Score = 29.9 bits (64), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 402 MEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTE--TDA-KVLSIIKEQTE 560
ME +VTE + T+ ++ IE + TG G K K TE TD +V + E+ E
Sbjct: 308 MESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
>AL133288-1|CAI22305.1| 356|Homo sapiens chromosome 1 open reading
frame 55 protein.
Length = 356
Score = 29.9 bits (64), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 402 MEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTE--TDA-KVLSIIKEQTE 560
ME +VTE + T+ ++ IE + TG G K K TE TD +V + E+ E
Sbjct: 213 MESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 268
>AK127780-1|BAC87130.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ45881 fis, clone OCBBF3020414. ).
Length = 439
Score = 29.9 bits (64), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 402 MEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTE--TDA-KVLSIIKEQTE 560
ME +VTE + T+ ++ IE + TG G K K TE TD +V + E+ E
Sbjct: 296 MESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 351
>AK092701-1|BAC03952.1| 356|Homo sapiens protein ( Homo sapiens
cDNA FLJ35382 fis, clone SKMUS2007915, weakly similar to
Splicing factor 3a, subunit 3, 60kD. ).
Length = 356
Score = 29.9 bits (64), Expect = 8.1
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 402 MEMEVVTEADVTRALINIKEDKIEMKKTGGGFWKPKSTE--TDA-KVLSIIKEQTE 560
ME +VTE + T+ ++ IE + TG G K K TE TD +V + E+ E
Sbjct: 213 MESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 268
>AJ004974-1|CAA06248.1| 282|Homo sapiens cell cycle checkpoint
protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF084512-1|AAC35549.1| 282|Homo sapiens DNA repair exonuclease
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF076841-1|AAC95523.1| 282|Homo sapiens Rad1-like protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF074717-1|AAC98093.1| 282|Homo sapiens Rad1-like DNA damage
checkpoint protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF073524-1|AAC95466.1| 282|Homo sapiens RAD1 protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF058392-1|AAC14138.1| 282|Homo sapiens cell cycle checkpoint
protein Hrad1 protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF030933-1|AAC95427.1| 282|Homo sapiens exonuclease homolog RAD1
protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
>AF011905-1|AAC27243.1| 282|Homo sapiens HRAD1 protein.
Length = 282
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 311 IPGTTTAAAIIF*GYSYPNLLFL 243
+PGT TA + + GY YP +LFL
Sbjct: 101 MPGTLTALRMCYQGYGYPLMLFL 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,423,195
Number of Sequences: 237096
Number of extensions: 1614108
Number of successful extensions: 3559
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3559
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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