Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14o20f
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       25   0.83 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    23   3.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    23   3.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   3.3  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   7.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   7.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   7.7  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 515 GNRCKSSFNNKRTDG 559
           GNR ++ FNNK  DG
Sbjct: 96  GNRGRTGFNNKNKDG 110


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 234 IIQKKKEVWITITSKYN 284
           +I  K E+W+ + +KY+
Sbjct: 93  LIDNKPEIWVLLEAKYD 109


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 234 IIQKKKEVWITITSKYN 284
           +I  K E+W+ + +KY+
Sbjct: 93  LIDNKPEIWVLLEAKYD 109


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
 Frame = +3

Query: 222 TGGIIIQKKKE----VWITITSKYNSSCSSGPR--DVDQLKALYDNMKQKSRKEISEKNK 383
           +GGII++KK+E    +W     + N +  +  +  ++ QLK    +   K  + + E  K
Sbjct: 135 SGGIILRKKREFMQKIWPFKEYQMNGNNITNFKNSNIFQLKQHMRDTMNKIAETLDEDTK 194

Query: 384 EAYIQAMEMEVVTEADVTRAL 446
              I+  +   +   ++ R++
Sbjct: 195 NKLIEESKTVFILNNEIIRSI 215


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +3

Query: 216 KRTGGIIIQKKKEVWITITSKYN 284
           K+    +++ K E+W ++ +KY+
Sbjct: 88  KKVIKFLVENKPELWDSLANKYD 110


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +3

Query: 216 KRTGGIIIQKKKEVWITITSKYN 284
           K+    +++ K E+W ++ +KY+
Sbjct: 88  KKVIKFLVENKPELWDSLANKYD 110


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +3

Query: 216 KRTGGIIIQKKKEVWITITSKYN 284
           K+    +++ K E+W ++ +KY+
Sbjct: 88  KKVIKFLVENKPELWDSLANKYD 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,160
Number of Sequences: 438
Number of extensions: 3880
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)