Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14o07r
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finge...    32   2.6  
BC117387-1|AAI17388.1|  935|Homo sapiens BRPF3 protein protein.        32   2.6  
BC033652-1|AAH33652.2|  602|Homo sapiens BRPF3 protein protein.        32   2.6  
AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.     32   2.6  

>Z84485-2|CAI21669.1| 1205|Homo sapiens bromodomain and PHD finger
           containing, 3 protein.
          Length = 1205

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 575 SMLQLRTPXLQVAPVNIVDEPVEKTXEEIENDSEVGSISWVEYXAELDE-DGNGLVIXDL 399
           S +Q   P L  A    +++P E    E+E D +   ++W++   E    DG+ LV  D 
Sbjct: 124 SGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSAD- 182

Query: 398 PIEAQPEDLEKAQLVD 351
             E   + LEK   ++
Sbjct: 183 TFELLVDRLEKESYLE 198


>BC117387-1|AAI17388.1|  935|Homo sapiens BRPF3 protein protein.
          Length = 935

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 575 SMLQLRTPXLQVAPVNIVDEPVEKTXEEIENDSEVGSISWVEYXAELDE-DGNGLVIXDL 399
           S +Q   P L  A    +++P E    E+E D +   ++W++   E    DG+ LV  D 
Sbjct: 124 SGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSAD- 182

Query: 398 PIEAQPEDLEKAQLVD 351
             E   + LEK   ++
Sbjct: 183 TFELLVDRLEKESYLE 198


>BC033652-1|AAH33652.2|  602|Homo sapiens BRPF3 protein protein.
          Length = 602

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 575 SMLQLRTPXLQVAPVNIVDEPVEKTXEEIENDSEVGSISWVEYXAELDE-DGNGLVIXDL 399
           S +Q   P L  A    +++P E    E+E D +   ++W++   E    DG+ LV  D 
Sbjct: 100 SGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSAD- 158

Query: 398 PIEAQPEDLEKAQLVD 351
             E   + LEK   ++
Sbjct: 159 TFELLVDRLEKESYLE 174


>AB033112-1|BAA86600.1| 1214|Homo sapiens KIAA1286 protein protein.
          Length = 1214

 Score = 31.9 bits (69), Expect = 2.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -3

Query: 575 SMLQLRTPXLQVAPVNIVDEPVEKTXEEIENDSEVGSISWVEYXAELDE-DGNGLVIXDL 399
           S +Q   P L  A    +++P E    E+E D +   ++W++   E    DG+ LV  D 
Sbjct: 133 SGIQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDLAWLDMVNEKRRVDGHSLVSAD- 191

Query: 398 PIEAQPEDLEKAQLVD 351
             E   + LEK   ++
Sbjct: 192 TFELLVDRLEKESYLE 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,109,216
Number of Sequences: 237096
Number of extensions: 1328638
Number of successful extensions: 3120
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3117
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)