Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14n24f
(588 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 42 6e-06
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 24 0.96
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 1.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 1.3
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 1.7
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 2.2
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 22 5.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.8
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 6.8
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 41.5 bits (93), Expect = 6e-06
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Frame = +1
Query: 175 TRIAGGSTARLGDHPFLAGLLVLLQNRRTSVCGSSILTNTRLVTAAHCWWDGTNQGTEIT 354
+RI GG+ + + P +AG+ + +CG++I++ ++TAAHC D T++
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPGM--ICGATIISKRYVLTAAHCIID--ENTTKLA 214
Query: 355 AVFG-----SVTLFSGGTRVTTRTIAMHGSFNTRNLN----NDIAII-TVPRINFNNNIQ 504
V G S T + + + +H ++ + NDIA++ T I F + +
Sbjct: 215 IVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVG 274
Query: 505 RIAIPNSSQSFL-SFVGSWAQCAGFGVT 585
+P Q FL SF GS G+G T
Sbjct: 275 PACLP--FQHFLDSFAGSDVTVLGWGHT 300
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 24.2 bits (50), Expect = 0.96
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 169 DGTRIAGGSTARLGDHPFLAGLLVLLQNRRTSVCGSSIL 285
DG R G AR + GL+ +L+N + VC +I+
Sbjct: 439 DGPRNCIG--ARFAVYQTKVGLITILRNHKVEVCEKTII 475
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 396 SGATREE-SYGSEDRGNFSTLVGSIPP 319
SG + E SYG + R N T+V +PP
Sbjct: 5 SGPSYEAFSYGGQARFNNQTVVDKVPP 31
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 244 RAPIIQQGKDDPLSVQWILLR 182
R P+ +GK +P++V W L R
Sbjct: 578 RGPVTMKGKSEPMNV-WFLSR 597
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 244 RAPIIQQGKDDPLSVQWILLR 182
R P+ +GK +P++V W L R
Sbjct: 578 RGPVTMKGKSEPMNV-WFLSR 597
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.4 bits (48), Expect = 1.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 483 DPGNSNDGNIIVQVSSVEATVHSNGSGCD 397
D G NDGN + S+ + SNG C+
Sbjct: 353 DQGPPNDGNGNILSPSIHDNICSNGWICE 381
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 588 PGYSKACALSPATDEGEERLRA 523
PG +AC SPAT E L A
Sbjct: 24 PGTIQACTTSPATASLESSLSA 45
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.8 bits (44), Expect = 5.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 204 ACSGSSCDPGAIKVHSFLNSLDTL--CSGNTFS 112
A +GSSC PGA + L+ ++ CS T S
Sbjct: 150 APTGSSCGPGAAAAAALLSKRRSVSECSLGTAS 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 50 WNESEYGGVKDLRITPNKLW 69
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 118 WNESEYGGVKDLRITPNKLW 137
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +3
Query: 327 WNQPGY*NYRGLRIRNSLLW 386
WN+ Y + LRI + LW
Sbjct: 118 WNESEYGGVKDLRITPNKLW 137
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/44 (18%), Positives = 25/44 (56%)
Frame = -1
Query: 549 DEGEERLRAVGYRYTLNVVVEIDPGNSNDGNIIVQVSSVEATVH 418
++ + +++ Y YT+N +++ D II++ + V ++++
Sbjct: 46 EKRQAAIQSGDYNYTMNYLLDTDQWGDKTFVIIMKFNGVPSSLN 89
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,987
Number of Sequences: 438
Number of extensions: 4233
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -