Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14n04f
         (597 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045           29   3.7  
02_04_0648 - 24716249-24717841                                         28   6.5  
02_04_0431 - 22841708-22842571,22842659-22842743,22842796-228428...    27   8.6  

>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
          Length = 1294

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +3

Query: 360  KCKYSFIFNVIKSVDIFKILLHFKEVSIITFICMKS*ANMATRQMLHSISLNTCKK 527
            KCKY      + S D+FK L   K + II    + S   + + Q L  + ++ C K
Sbjct: 1052 KCKY---LESLPSHDVFKSLKSLKSLEIIGCENLSSLGGLGSLQYLLELKISACSK 1104


>02_04_0648 - 24716249-24717841
          Length = 530

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 556 PYLTLTICMLFLQVLRLIECNICLVAMLAYDFIQINVM 443
           P +    C + +Q++R I C+ C      +DFI+ +++
Sbjct: 119 PLVLRAACAIGVQLVRSIHCHACKDGFYGHDFIRTSLL 156


>02_04_0431 -
           22841708-22842571,22842659-22842743,22842796-22842869,
           22842953-22843002,22843086-22843167,22843941-22843987,
           22844089-22844131,22844219-22844299,22844413-22844458,
           22844557-22844603,22844709-22844774,22845030-22845096,
           22845194-22845279
          Length = 545

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 478 MLAYDFIQINVMIETSLKCNNILKISTDLITL 383
           +LA D++  N ++   LKC+NIL    + I L
Sbjct: 114 LLALDYLHCNRVLHRDLKCSNILLTKDNNIRL 145


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,640,431
Number of Sequences: 37544
Number of extensions: 257605
Number of successful extensions: 531
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)