Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14n04f
(597 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 3.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.0
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 6.9
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 6.9
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 6.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.2
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 107 HEEIRIPQCFI**AAQGWCISLHRIDIVWD 196
+ I P CF+ W I LH D+V D
Sbjct: 407 YSRIVFPVCFVCFNLMYWIIYLHISDVVAD 436
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 2.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 107 HEEIRIPQCFI**AAQGWCISLHRIDIVWD 196
+ I P CF+ W I LH D+V D
Sbjct: 407 YSRIVFPVCFVCFNLMYWIIYLHISDVVAD 436
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 199 FYSLITFTSTSSMCGHRYKHPKQLLNKSFCQKVLQRK 309
FYS + S+ S C K + LL S Q+ +R+
Sbjct: 958 FYSSFLYKSSESSCNPDQKPTEYLLEDSMKQQYGKRR 994
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 463 FIQINVMIETSLKCNNILKISTDLITLKIKLYLHFHY 353
F+ INV++ + C I++ ++KLYL Y
Sbjct: 12 FVIINVLLHGQVICFVCKDITSTSALYRLKLYLFCDY 48
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 77 NNSHFHPFQYHEEIRIPQC 133
NN+ H F YHE C
Sbjct: 1733 NNTLLHSFMYHEHAMTEGC 1751
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 77 NNSHFHPFQYHEEIRIPQC 133
NN+ H F YHE C
Sbjct: 1729 NNTLLHSFMYHEHAMTEGC 1747
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 190 YNVNPMQTNTPPLCSLSYKALRDPYFFMVLK 98
Y N P + +LRDP FF + K
Sbjct: 392 YESNVKYQVVPSALQMWSTSLRDPVFFSIYK 422
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 190 YNVNPMQTNTPPLCSLSYKALRDPYFFMVLK 98
Y N P + +LRDP FF + K
Sbjct: 392 YESNVKYQVVPSALQMWSTSLRDPVFFSIYK 422
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -3
Query: 190 YNVNPMQTNTPPLCSLSYKALRDPYFFMVLK 98
Y N P + +LRDP FF + K
Sbjct: 18 YESNVKYQVVPSALQMWSTSLRDPVFFSIYK 48
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 389 YIKDKTIFTFSLLKQTLKYYINPPLHN 309
Y +D + LKQ L N LHN
Sbjct: 446 YERDTCLLASDALKQILSAAYNVELHN 472
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.0 bits (42), Expect = 9.2
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 389 YIKDKTIFTFSLLKQTLKYYINPPLHN 309
Y +D + LKQ L N LHN
Sbjct: 484 YERDTCLLASDALKQILSAAYNVELHN 510
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,003
Number of Sequences: 438
Number of extensions: 3145
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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