Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14n03f
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 33 0.18
AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical ... 31 0.54
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 29 2.2
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 29 2.2
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 29 2.9
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 29 3.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.0
U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.7
U58748-3|AAB52966.3| 332|Caenorhabditis elegans Hypothetical pr... 27 8.7
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 27 8.7
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 27 8.7
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 27 8.7
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 27 8.7
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 27 8.7
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 27 8.7
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +1
Query: 559 EEFVRRFQGTKPINKVLIANNGIGAVNACV 648
+EFV+ +G + I ++L+ANNG+ A+ +
Sbjct: 18 DEFVKMLEGGRSIKRILVANNGLAAMKCLI 47
>AC024812-1|AAF59552.2| 364|Caenorhabditis elegans Hypothetical
protein Y54E10BR.4 protein.
Length = 364
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 289 RFVLGESEEPKSFEDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDS 450
R + E++ ++ EDDE + I + Q+T+ + E+ + +E +NEE DS
Sbjct: 99 RQYVAENDVAETTEDDEKKNIEDLSAKVEQVTVGENTEDTKEEEIEENEESEDS 152
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 253 NKLNMLKRRTSK--RFVLGESEEPKSFEDDEAEVI--PSALVQKFQMTLNTDPEENEGDE 420
NK ++K+ K + +SEE S +D+E E P A QK + + + D + +G+E
Sbjct: 96 NKEKVVKKDQKKQDKKADSDSEEDDSSDDEEKEETDEPVAKKQKKEESSDDDEDSEDGEE 155
Query: 421 SRKNEERVDSRLLKPPNVGTLQPSMSQGTVVHS 519
N V++ + PS TV S
Sbjct: 156 PEGNNGAVEAEDSDSTDEEEETPSKPNKTVAQS 188
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 253 NKLNMLKRRTSK--RFVLGESEEPKSFEDDEAEVI--PSALVQKFQMTLNTDPEENEGDE 420
NK ++K+ K + +SEE S +D+E E P A QK + + + D + +G+E
Sbjct: 114 NKEKVVKKDQKKQDKKADSDSEEDDSSDDEEKEETDEPVAKKQKKEESSDDDEDSEDGEE 173
Query: 421 SRKNEERVDSRLLKPPNVGTLQPSMSQGTVVHS 519
N V++ + PS TV S
Sbjct: 174 PEGNNGAVEAEDSDSTDEEEETPSKPNKTVAQS 206
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 271 KRRTSKRFVLGESEEPK---SFEDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEER 441
K++ +K+ E PK FE+ E+E + ++ + E+NE D+ K E+
Sbjct: 39 KKKRAKKVPSKPREGPKLIDEFEEKESEKEAAEKEKEKEKEKEKTHEKNEADKEEKEAEK 98
Query: 442 VDSRLLKPP 468
+ + KPP
Sbjct: 99 EEEKEEKPP 107
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = +1
Query: 262 NMLKRRTSKRFVLGESE--EPKSFEDD--EAEVIPSALVQKFQMTLNTDPEE--NEGDES 423
NM K +L +S+ E S ED+ E E S L L + EE N D
Sbjct: 84 NMAKNEVEIPCILDKSQYLEESSLEDEMREIEQNKSYLDDPLTKILKKELEEIKNYEDFQ 143
Query: 424 RKNEERVDSRLLKPPNVGTLQPSMS 498
+NE+ +D+ ++K P +QP S
Sbjct: 144 VRNEQVLDNIIIKKPLYRPIQPEQS 168
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +1
Query: 214 VLKNLTALVDYFGNKLNMLKRRTSKRFVLGESEEPKSFEDDEAEVIPSALVQKFQMTLNT 393
V ++++ V G KL+ + S ++ G + D E + S + +
Sbjct: 383 VADSVSSAVHTVGEKLHDAEEAASN-YMHGAHKSASEAAHDTKEAVTSKAAEVEKSA--A 439
Query: 394 DPEENEGDESRKNEERVDSRLLKPPNVGTLQPSMSQG 504
D +N DE++K E V+ ++ + GTL PS G
Sbjct: 440 DAAKNTADEAKKTAEHVEQKVDENLKTGTL-PSPKSG 475
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +1
Query: 214 VLKNLTALVDYFGNKLNMLKRRTSKRFVLGESEEPKSFEDDEAEVIPSALVQKFQMTLNT 393
V ++++ V G KL+ + S ++ G + D E + S + +
Sbjct: 383 VADSVSSAVHTVGEKLHDAEEAASN-YMHGAHKSASEAAHDTKEAVTSKAAEVEKSA--A 439
Query: 394 DPEENEGDESRKNEERVDSRLLKPPNVGTLQPSMSQG 504
D +N DE++K E V+ ++ + GTL PS G
Sbjct: 440 DAAKNTADEAKKTAEHVEQKVDENLKTGTL-PSPKSG 475
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 328 EDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDSRLLKPPNVG 477
E++ E +P++ V+K + ++ PE + E K +R +S N+G
Sbjct: 10553 EEEIDETVPTSPVEKVKEPVSKKPENTKESEGHKKRDRKESEDHDENNLG 10602
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 328 EDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDSRLLKPPNVG 477
E++ E +P++ V+K + ++ PE + E K +R +S N+G
Sbjct: 10553 EEEIDETVPTSPVEKVKEPVSKKPENTKESEGHKKRDRKESEDHDENNLG 10602
>U21319-4|AAL02455.1| 1097|Caenorhabditis elegans Hypothetical protein
C30G12.6b protein.
Length = 1097
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 310 EEPKSFEDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDS 450
EE K DD E +P + + + T+N + ++N E +++ DS
Sbjct: 1048 EEEKIDADDSFEYVPKSTRTRIRPTVNVEEDQNIKTEIEDSDDLEDS 1094
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +1
Query: 355 SALVQKFQMTLNTDPEENEGDESRKNEERV--DSRLLKPPNVGTLQPS--MSQGTVVHS- 519
+ ++Q TL PE++E D+S ++ V +S + NV P SQ + S
Sbjct: 317 NGIMQLMNQTLEQLPEDSEEDDSSRSRSNVNIESHDMHRLNVNQSMPDRRSSQIEEIKSL 376
Query: 520 -QRFQEKDFTVATPEEFVRR 576
+ +EK + PE +V+R
Sbjct: 377 LEEQEEKPLDMTWPETWVKR 396
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = +1
Query: 304 ESEEPKSFEDDEAEVIPSALVQKFQMTLNTD-PEENEG------DESRKNEERVDSRLLK 462
E E+ ++ E E +V +K + T T+ PE++E +E + EE S K
Sbjct: 482 EEEKEETTETTE-KVTTVGKSKKTKATTTTEEPEDDEDVYVDDDEEGTEEEEEEVSTTEK 540
Query: 463 PPNVGTLQPSMSQGTVVHSQRFQEKDFTVATPEEFVRRFQGTKP 594
T S+ V+ +RF + F+R QG KP
Sbjct: 541 STTTTTTTTEASKSKKVNMERFWRLSNKPSGKSPFLRHSQGNKP 584
>U58748-3|AAB52966.3| 332|Caenorhabditis elegans Hypothetical
protein ZK180.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 647 THAFTAPIPLLAINTLFXGFVPWNRLTNSSGVATVKSFSWKR 522
THA A + T F VP +R TN + V F WKR
Sbjct: 133 THAKFASSDSHELFTTFFRVVPGSRNTNMAKCKFVNHFGWKR 174
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 241 DYFGNKLNMLKRRT-SKRFVLGESEEPKSFEDDEAEVIPSALVQKFQM 381
D ++ N LK KRF LGES+ + F D A+ I + + +KFQ+
Sbjct: 1484 DQILDRWNGLKEALIQKRFKLGESQTLQQFSRD-ADEIENWMTEKFQI 1530
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Frame = +1
Query: 304 ESEEPKSFEDDEAEVIPSALVQKFQMTLNTD-PEENEG------DESRKNEERVDSRLLK 462
E E+ ++ E E +V +K + T T+ PE++E +E + EE S K
Sbjct: 482 EEEKEETTETTE-KVTTVGKSKKTKATTTTEEPEDDEDVYVDDDEEGTEEEEEEVSTTEK 540
Query: 463 PPNVGTLQPSMSQGTVVHSQRFQEKDFTVATPEEFVRRFQGTKP 594
T S+ V+ +RF + F+R QG KP
Sbjct: 541 STTTTTTTTEASKSKKVNMERFWRLSNKPSGKSPFLRHSQGNKP 584
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +1
Query: 355 SALVQKFQMTLNTDPEENEGDESRKNEERV--DSRLLKPPNVGTLQPS--MSQGTVVHS- 519
+ ++Q TL PE++E D+S ++ V +S + NV P SQ + S
Sbjct: 317 NGIMQLMNQTLEQLPEDSEEDDSSRSRSNVNIESHDMHRLNVNQSMPDRRSSQIEEIKSL 376
Query: 520 -QRFQEKDFTVATPEEFVRR 576
+ +EK + PE +V+R
Sbjct: 377 LEEQEEKPLDMTWPETWVKR 396
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +1
Query: 271 KRRTSKRFVLGESEEPKSFEDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDS 450
K+R +K+ SEE +DD+ E P +K + + E+E DES + E+R S
Sbjct: 52 KKRPAKKRKASSSEE----DDDDEEESPRKSSKKSRKRAKS---ESESDESDEEEDRKKS 104
Query: 451 RLLKPPNVGTLQPSMSQGTVVHSQ 522
+ K + + S + T S+
Sbjct: 105 KSKKKVDQKKKEKSKKKRTTSSSE 128
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 328 EDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDSRLLKPPNVGTLQP 489
ED A PS + +++ DP E R EER +S PP V P
Sbjct: 574 EDPHASSDPSPSTSDLRSSMDADP----ATEKRATEERSESSRSLPPTVDVSSP 623
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +1
Query: 271 KRRTSKRFVLGESEEPKSFEDDEAEVIPSALVQKFQMTLNTDPEENEGDESRKNEERVDS 450
K+R +K+ SEE +DD+ E P +K + + E+E DES + E+R S
Sbjct: 52 KKRPAKKRKASSSEE----DDDDEEESPRKSSKKSRKRAKS---ESESDESDEEEDRKKS 104
Query: 451 RLLKPPNVGTLQPSMSQGTVVHSQ 522
+ K + + S + T S+
Sbjct: 105 KSKKKVDQKKKEKSKKKRTTSSSE 128
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 393 RVEGHLKLLHEGRRYD 346
R++ H+K ++EGRRYD
Sbjct: 744 RLKAHIKAINEGRRYD 759
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,141,338
Number of Sequences: 27780
Number of extensions: 256000
Number of successful extensions: 888
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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