Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14m24r
         (315 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017016-1|AAH17016.1|  295|Homo sapiens Lck interacting transme...    29   2.9  
AL121845-10|CAC03671.1|  295|Homo sapiens novel protein protein.       29   2.9  
AK000413-1|BAA91148.1|  295|Homo sapiens protein ( Homo sapiens ...    29   2.9  
BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.     28   5.0  
AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease ...    28   5.0  
AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens ...    28   5.0  
AB048797-1|BAB39742.2|  537|Homo sapiens mosaic serine protease ...    28   5.0  
AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic se...    28   5.0  
BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.     27   8.8  

>BC017016-1|AAH17016.1|  295|Homo sapiens Lck interacting
           transmembrane adaptor 1 protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 225 DVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSAVFWSTSP 46
           D+ ++    R LD+    L N    +    DP  R    G+ +PP +S P     W   P
Sbjct: 232 DLAYQTLPLRALDVDSGPLENVYESIRELGDPAGRSSTCGAGTPPASSCPSLGRGWRPLP 291

Query: 45  NS 40
            S
Sbjct: 292 AS 293


>AL121845-10|CAC03671.1|  295|Homo sapiens novel protein protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 225 DVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSAVFWSTSP 46
           D+ ++    R LD+    L N    +    DP  R    G+ +PP +S P     W   P
Sbjct: 232 DLAYQTLPLRALDVDSGPLENVYESIRELGDPAGRSSTCGAGTPPASSCPSLGRGWRPLP 291

Query: 45  NS 40
            S
Sbjct: 292 AS 293


>AK000413-1|BAA91148.1|  295|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20406 fis, clone KAT01634. ).
          Length = 295

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 225 DVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSAVFWSTSP 46
           D+ ++    R LD+    L N    +    DP  R    G+ +PP +S P     W   P
Sbjct: 232 DLAYQTLPLRALDVGSGPLENVYESIRELGDPAGRSSTCGAGTPPASSCPSLGRGWRPLP 291

Query: 45  NS 40
            S
Sbjct: 292 AS 293


>BC114928-1|AAI14929.1|  562|Homo sapiens TMPRSS13 protein protein.
          Length = 562

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 313 FNFLRENPINNEGLHLCPCPSLR-VGCATSRCRFRA 209
           F+ LR N    E LH   CPS R +    S C  RA
Sbjct: 281 FSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRA 316


>AY190317-1|AAO38062.1|  558|Homo sapiens transmembrane protease
           serine 6 protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 313 FNFLRENPINNEGLHLCPCPSLR-VGCATSRCRFRA 209
           F+ LR N    E LH   CPS R +    S C  RA
Sbjct: 281 FSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRA 316


>AK027798-1|BAB55376.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
           TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
          Length = 491

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 313 FNFLRENPINNEGLHLCPCPSLR-VGCATSRCRFRA 209
           F+ LR N    E LH   CPS R +    S C  RA
Sbjct: 286 FSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRA 321


>AB048797-1|BAB39742.2|  537|Homo sapiens mosaic serine protease
           protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 313 FNFLRENPINNEGLHLCPCPSLR-VGCATSRCRFRA 209
           F+ LR N    E LH   CPS R +    S C  RA
Sbjct: 256 FSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRA 291


>AB048796-1|BAB39741.2|  581|Homo sapiens membrane-type mosaic
           serine protease protein.
          Length = 581

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 313 FNFLRENPINNEGLHLCPCPSLR-VGCATSRCRFRA 209
           F+ LR N    E LH   CPS R +    S C  RA
Sbjct: 281 FSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRA 316


>BC110893-1|AAI10894.1|  480|Homo sapiens C19orf55 protein protein.
          Length = 480

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 108 GSWSPPGASEPRS 70
           GSWSPP  S PRS
Sbjct: 451 GSWSPPAGSPPRS 463


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,784,559
Number of Sequences: 237096
Number of extensions: 850079
Number of successful extensions: 2496
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2496
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)