Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14m24r
         (315 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    26   0.12 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.29 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   6.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   8.1  

>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.8 bits (54), Expect = 0.12
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -1

Query: 294 IQSTMKAFIFALALACVSAV 235
           + +T +AFI++LAL C+ A+
Sbjct: 2   VSNTKQAFIYSLALLCLHAI 21


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -1

Query: 288 STMKAFIFALALACVSAV 235
           +T +AFI++LAL C+ A+
Sbjct: 4   NTKQAFIYSLALLCLHAI 21


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 117 GYAGSWSPPGASEPRSAVFWSTSPNSSS 34
           G+A + S PG  E  S  F  TS  ++S
Sbjct: 910 GFATAASSPGLLERASPAFSGTSSPTNS 937


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 99  SPPGASEPRSAVFWSTSPNSSST 31
           SP G+S   S    STSP + +T
Sbjct: 63  SPTGSSPQHSGSSASTSPAARTT 85


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 13/55 (23%), Positives = 25/55 (45%)
 Frame = +2

Query: 50  DVLQNTADLGSDAPGGLQEPA*PSRRRGSAALNNSPISLNKFEITMSRMR*ELGS 214
           ++ Q T    S     L+ P    R+R S+ + N   + +    T ++MR + G+
Sbjct: 192 EISQMTEPSSSTKSYVLEGPRNGKRKRKSSTIENESETESNASSTKTKMRRKSGA 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,994
Number of Sequences: 438
Number of extensions: 1596
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)