Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14m24f
(361 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0677 + 5087584-5087589,5088890-5089172,5093561-5093704,509... 31 0.21
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 30 0.48
01_06_1057 - 34142979-34143114,34143212-34143390,34143496-341436... 29 1.1
06_03_0309 + 19447458-19447620,19448383-19448459,19448894-19448986 28 1.9
05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675... 28 1.9
05_04_0068 + 17635693-17637204 27 3.4
01_01_1213 - 9769268-9769975 27 3.4
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 27 4.4
06_03_1479 + 30428488-30428502,30428619-30428715,30429627-304299... 27 4.4
03_06_0729 - 35771936-35772050,35772469-35772995 27 4.4
03_05_0642 - 26346260-26346367,26347902-26348162,26348542-263498... 27 4.4
01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233... 27 4.4
07_03_1474 - 26766078-26766536,26766634-26766885,26767201-267674... 27 5.9
07_03_0492 + 18712145-18712429,18712541-18712669,18712812-18713396 27 5.9
04_04_1545 - 34278266-34278586,34278685-34279114,34279225-342793... 27 5.9
02_05_0953 - 33027007-33029079 27 5.9
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 26 7.7
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 26 7.7
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 26 7.7
03_01_0223 - 1766292-1766442,1767621-1767676,1767798-1767891,176... 26 7.7
02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064... 26 7.7
01_05_0645 - 23899579-23904483 26 7.7
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 26 7.7
01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069 26 7.7
>07_01_0677 +
5087584-5087589,5088890-5089172,5093561-5093704,
5094167-5095269
Length = 511
Score = 31.5 bits (68), Expect = 0.21
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 214 WSPPGASEPRSAVFWSTSPNSS 279
WS + PRS + WS+SPNS+
Sbjct: 108 WSSKNPAPPRSIILWSSSPNSA 129
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 30.3 bits (65), Expect = 0.48
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 283 LMTSWATYSRTRLTSALMHPEGSRSQRSRHGGEDQPLSTIHR 158
+ T W T S ++ S +HP Q S +GG+D PL +I +
Sbjct: 231 VFTEWETTSGNKVDS--VHPSFESIQLSHNGGKDCPLKSISK 270
>01_06_1057 -
34142979-34143114,34143212-34143390,34143496-34143669,
34143757-34144005,34144108-34144233,34144341-34144565,
34144657-34144747,34144837-34144951,34145312-34145366
Length = 449
Score = 29.1 bits (62), Expect = 1.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 86 CGTADTQARARAKMKAFIVDWIL 18
C DTQ +KM+A + DWI+
Sbjct: 210 CDYIDTQVEINSKMRAILADWII 232
>06_03_0309 + 19447458-19447620,19448383-19448459,19448894-19448986
Length = 110
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 226 GASEPRSAVFWSTSPN 273
GA +PRSA FW +PN
Sbjct: 46 GALKPRSAAFWDVTPN 61
>05_04_0307 +
20066169-20066410,20066803-20066858,20067490-20067581,
20068400-20068502,20068623-20068760,20068898-20069148
Length = 293
Score = 28.3 bits (60), Expect = 1.9
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 88 RDVDFEPNSQRILDIVISNLFNEIGELLRAAD 183
RDV+ PN + + D+ N +E+ ELL+ AD
Sbjct: 219 RDVELSPNPEEVADVKYVNR-DELKELLKKAD 249
>05_04_0068 + 17635693-17637204
Length = 503
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 205 AGSWSPPGAS-EPRSAVFWSTSPNSSS 282
AG WSP +S RS+ ++S+S +SSS
Sbjct: 32 AGGWSPSSSSRSARSSSYYSSSKSSSS 58
>01_01_1213 - 9769268-9769975
Length = 235
Score = 27.5 bits (58), Expect = 3.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 211 SWSPPGASEPRSAVFWSTSPNSSSTDYC 294
+W P A + +A W++ SS++ YC
Sbjct: 26 TWLSPAADDAITAALWASMAPSSASSYC 53
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 209 APGALRVHQSRGQPCSGVRRPTRHQQITVNYSND-TCESKINY 334
A A S G PC +R P+ H TVN D E K+ Y
Sbjct: 141 ASTAAEFFASNGYPCPPMRNPSDHFLRTVNKDFDKESEEKLQY 183
>06_03_1479 +
30428488-30428502,30428619-30428715,30429627-30429904,
30430256-30431032,30431254-30431343,30431538-30431605,
30431696-30431789,30431902-30431961
Length = 492
Score = 27.1 bits (57), Expect = 4.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 142 NLFNEIGELLRAADPLRRDGYAGSWSPPGASEPR 243
N F + GE R+ DP R+D + W S+PR
Sbjct: 426 NNFQQAGERYRSFDPARQDRFLQRW-VDALSDPR 458
>03_06_0729 - 35771936-35772050,35772469-35772995
Length = 213
Score = 27.1 bits (57), Expect = 4.4
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 40 AFIFALALACVSAVPHRDVDFEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWS 219
A + +L + + A+P P+S D ++ L N+I A D LRR S+S
Sbjct: 2 AHVLSLLVVILVAIPSSRSHALPSSSSPFDAALATLQNQIAYRFHAPDLLRRAMTHASYS 61
>03_05_0642 -
26346260-26346367,26347902-26348162,26348542-26349849,
26349960-26350178,26350241-26350300,26352159-26352215,
26352945-26353029,26353486-26353843,26353931-26355170
Length = 1231
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 16 ERIQSTMKAFIFALALACVSAVPHRDVDFEPNSQR 120
+RIQ +KAF AL VPHRD P R
Sbjct: 596 QRIQEGLKAFKNDWALVWRFVVPHRDPSLLPRQWR 630
>01_07_0255 -
42322111-42322308,42322658-42322750,42323127-42323344,
42323476-42323642,42324097-42324207,42324267-42324409,
42324492-42324710,42324975-42325055,42325202-42325381,
42325971-42326301,42326775-42326888,42327036-42327127,
42327631-42328059
Length = 791
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 184 PLRRDGYAGSWSPPGASEPRSAVFWSTSPNSSST 285
P RR ++ SW PP PR ST+ SSS+
Sbjct: 23 PFRRFLHSPSWRPPPPPPPRRHRLLSTAVASSSS 56
>07_03_1474 -
26766078-26766536,26766634-26766885,26767201-26767401,
26767986-26768156,26768249-26768433,26768526-26768851,
26769430-26770631
Length = 931
Score = 26.6 bits (56), Expect = 5.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 271 WATYSRTRLTSALMHPEGSRSQRSRHGGEDQPLSTIHR 158
W Y R RL A HP + S + ++ L+T+H+
Sbjct: 84 WHAYLRERLDHARPHPISHHAYASLNNTFERALATMHK 121
>07_03_0492 + 18712145-18712429,18712541-18712669,18712812-18713396
Length = 332
Score = 26.6 bits (56), Expect = 5.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 100 FEPNSQRILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSAVF 255
FE +LD+ + + + IG AA R YAG+ P + PR F
Sbjct: 179 FESRGLTVLDLAVLSGAHTIGRATCAAVKPRLWDYAGTGRPDASMSPRYGDF 230
>04_04_1545 -
34278266-34278586,34278685-34279114,34279225-34279322,
34279415-34279517,34279609-34279694,34279778-34279865,
34279950-34280063,34280147-34280235,34280369-34280484,
34280906-34280951
Length = 496
Score = 26.6 bits (56), Expect = 5.9
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 223 PGASEPRSAVF--WSTSPNSSSTDYCKLLERYL*IKNKLCS 339
PGA+EP + W T PNS + C L+ + + + C+
Sbjct: 385 PGATEPVQYLVSRWGTDPNSLGSYSCDLVGKPADLYERFCA 425
>02_05_0953 - 33027007-33029079
Length = 690
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 178 ADPLRRDGYAGSWSPPGASEPRSAVFWSTSPNSSSTDYCK 297
ADP+ R + G+ S PR A F S PN + + K
Sbjct: 393 ADPVARIDFLGTVINQSPSAPRVAAFSSRGPNRFAPEILK 432
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 118 RILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSA 249
R+L+ + S EL + AD + R A +W+P G+ SA
Sbjct: 243 RMLEKIASKEPQTTAELFQLADRVARKEEAWTWNPSGSGVAASA 286
>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
Length = 1275
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 277 TSWATYSRTRLTSALMHPEGSRSQRSRHGGEDQPLSTIHR 158
T W T S ++ S +HP Q S +GG+ PL +I +
Sbjct: 382 TEWETASGNKVDS--VHPPFESVQLSHNGGKACPLKSISK 419
>04_04_1405 -
33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 118 RILDIVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPRSA 249
R+L+ + S EL + AD + R A +W+P G+ SA
Sbjct: 173 RMLEKIASKEPQTTAELFQLADRVARKEEAWTWNPSGSGVAASA 216
>03_01_0223 -
1766292-1766442,1767621-1767676,1767798-1767891,
1768004-1768071,1768441-1769585,1770072-1770168,
1770265-1770279
Length = 541
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 130 IVISNLFNEIGELLRAADPLRRDGYAGSWSPPGASEPR 243
I N F + GE R+ DP R+D + W S+PR
Sbjct: 422 IAKENNFKQPGERYRSWDPARQDRFIKRWI-DALSDPR 458
>02_02_0536 +
11304298-11304400,11304731-11305797,11306026-11306416,
11307164-11308041
Length = 812
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 277 TSWATYSRTRLTSALMHPEGSRSQRSRHGGEDQPLSTIHR 158
T W T S ++ S +HP Q S +GG+ PL +I +
Sbjct: 303 TEWETTSGNKVDS--VHPPFESIQLSHNGGKACPLKSISK 340
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 26.2 bits (55), Expect = 7.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 277 TSWATYSRTRLTSALMHPEGSRSQRSRHGGEDQPLSTIHR 158
T W T S ++ S +HP Q S +GG+ PL +I +
Sbjct: 233 TEWETASGNKVDS--VHPPFESIQLSHNGGKACPLKSISK 270
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 91 DVDFEPNSQRILDIVISNLFNEIGEL 168
D D+E N Q +D+++ + IG+L
Sbjct: 284 DKDYEDNKQHEIDLLVKKTIDRIGQL 309
>01_01_0518 - 3810290-3810397,3810469-3810851,3810949-3811069
Length = 203
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 239 GSDAPGGLQEPA*PSRRRGSAA 174
G+ A GG QE A P+R+RG +A
Sbjct: 85 GAAAAGGGQEQAPPARKRGRSA 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,374,040
Number of Sequences: 37544
Number of extensions: 182050
Number of successful extensions: 618
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 554421256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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