Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14m24f
         (361 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    26   0.16 
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.36 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   7.7  

>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
          protein ASP1 protein.
          Length = 144

 Score = 25.8 bits (54), Expect = 0.16
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = +1

Query: 22 IQSTMKAFIFALALACVSAV 81
          + +T +AFI++LAL C+ A+
Sbjct: 2  VSNTKQAFIYSLALLCLHAI 21


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding
          protein ASP1 protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 28 STMKAFIFALALACVSAV 81
          +T +AFI++LAL C+ A+
Sbjct: 4  NTKQAFIYSLALLCLHAI 21


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 287 ITVNYSNDTCESKINYVL 340
           I  N S D CE+ +N+++
Sbjct: 119 INANKSTDKCENGLNFII 136


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +2

Query: 248 PCSGVRRPTRHQQITVNYSNDTCESKINY 334
           P   ++   RH ++    + D C+ +INY
Sbjct: 200 PMPTLKGDGRHMEVIKIKNFDNCDQRINY 228


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 199 GYAGSWSPPGASEPRSAVFWSTSPNSSS 282
           G+A + S PG  E  S  F  TS  ++S
Sbjct: 910 GFATAASSPGLLERASPAFSGTSSPTNS 937


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 217 SPPGASEPRSAVFWSTSPNSSST 285
           SP G+S   S    STSP + +T
Sbjct: 63  SPTGSSPQHSGSSASTSPAARTT 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,256
Number of Sequences: 438
Number of extensions: 1853
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)