Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14m20f
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical...    38   0.007
AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical ...    38   0.007
AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    38   0.007
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    36   0.022
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    35   0.039
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    32   0.36 
U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z81078-1|CAB03075.3|  441|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical
           protein Y73F8A.34a protein.
          Length = 485

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
 Frame = +3

Query: 348 QITPSLAKVALHAYEWNAQEIINKYKENAN--EVLVFSRVKXXXXXXXXXXXXXXXXXXX 521
           Q+ P + ++ LH ++WN   +++K+ E+++  E L  ++V                    
Sbjct: 62  QVEPGICRILLHKFKWNKDRLLDKFYEHSDTTEFLAEAQVIPKTSSSEEAAGSSAPPPGG 121

Query: 522 TPQ------LHKYSALACGHYFCNDCW 584
             +      + + S LAC H  C++CW
Sbjct: 122 DAECDVCCSMTRLSGLACAHRACDECW 148


>AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical
           protein C27A12.7b protein.
          Length = 433

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 16/79 (20%), Positives = 32/79 (40%)
 Frame = +3

Query: 348 QITPSLAKVALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 527
           Q+ P + ++ LH Y+WN + ++ +  E+  + + F                         
Sbjct: 13  QVDPGVCRILLHKYKWNKESLLERLYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 71

Query: 528 QLHKYSALACGHYFCNDCW 584
            + + S L+C H  C +CW
Sbjct: 72  SMDELSGLSCNHRACAECW 90


>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 16/79 (20%), Positives = 32/79 (40%)
 Frame = +3

Query: 348 QITPSLAKVALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 527
           Q+ P + ++ LH Y+WN + ++ +  E+  + + F                         
Sbjct: 77  QVDPGVCRILLHKYKWNKESLLERLYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 135

Query: 528 QLHKYSALACGHYFCNDCW 584
            + + S L+C H  C +CW
Sbjct: 136 SMDELSGLSCNHRACAECW 154


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 15/79 (18%), Positives = 32/79 (40%)
 Frame = +3

Query: 348 QITPSLAKVALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 527
           Q+   + ++ LH Y+WN + ++ ++ E+  + + F                         
Sbjct: 72  QVKTGVCRILLHKYKWNKESLLERFYEHP-DTIAFLIDAQVIPRQQEVIPAGDAECDICC 130

Query: 528 QLHKYSALACGHYFCNDCW 584
            + + S L+C H  C +CW
Sbjct: 131 SMDELSGLSCNHRACAECW 149


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 35.1 bits (77), Expect = 0.039
 Identities = 16/79 (20%), Positives = 30/79 (37%)
 Frame = +3

Query: 348 QITPSLAKVALHAYEWNAQEIINKYKENANEVLVFSRVKXXXXXXXXXXXXXXXXXXXTP 527
           Q+   + ++ LH Y+WN + ++ ++ E+  +   F                         
Sbjct: 74  QVKTGVCRILLHKYKWNKESLLERFYEHP-DTTTFLIDAHVIPRRQERLPAGDAECDICC 132

Query: 528 QLHKYSALACGHYFCNDCW 584
            L + S L+C H  C  CW
Sbjct: 133 SLGELSGLSCNHRACTQCW 151


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 0.36
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +3

Query: 549 LACGHYFCNDCWAMHFE 599
           L CGH FC  CW  H E
Sbjct: 143 LTCGHCFCEHCWKSHVE 159


>U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical
           protein F25B5.6c protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 390 EWNAQEIINKYKENANEVLVF 452
           EW A+EI+N  KEN  ++L+F
Sbjct: 344 EWAAEEIVNLKKENVKKILLF 364


>U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical
           protein F25B5.6a protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 390 EWNAQEIINKYKENANEVLVF 452
           EW A+EI+N  KEN  ++L+F
Sbjct: 370 EWAAEEIVNLKKENVKKILLF 390


>U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical
           protein F25B5.6b protein.
          Length = 521

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 390 EWNAQEIINKYKENANEVLVF 452
           EW A+EI+N  KEN  ++L+F
Sbjct: 381 EWAAEEIVNLKKENVKKILLF 401


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 394  GMLKK*LTNIKKMQMKCWFSVG*SHKCLHKVYQADQVVLF 513
            G L+K L + KKM+++CW S+     C ++  Q  Q+V F
Sbjct: 2937 GELRKLLVDWKKMEVRCWSSL--LINCENEAKQRAQLVAF 2974


>Z99288-6|CAB16549.2|  286|Caenorhabditis elegans Hypothetical
           protein ZK262.7 protein.
          Length = 286

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 464 LHPTENQHFICIFFIFVNYFLS 399
           L  T N +F+ +FFIFVN  +S
Sbjct: 144 LSTTRNGYFLTLFFIFVNTLIS 165


>Z81078-1|CAB03075.3|  441|Caenorhabditis elegans Hypothetical
           protein F36H2.2 protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 496 LLDILCEGTCGFTLLKTNTSFAFSLYLLIIS*AFHSYACSAT 371
           L+ ILC+      +L     F FSL +  IS A + Y  + T
Sbjct: 180 LMSILCQAVTSDVILNGQMYFGFSLIMCFISLATYYYLTTLT 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,722,961
Number of Sequences: 27780
Number of extensions: 203388
Number of successful extensions: 527
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)