Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14m18r
         (490 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.                30   4.9  
AL589763-1|CAH72043.1|  269|Homo sapiens novel protein protein.        30   4.9  
AL356512-1|CAH70642.1|  269|Homo sapiens novel protein protein.        30   4.9  
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.        30   4.9  
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.             30   4.9  

>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
          Length = 3321

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 170  DKADGRELGHPYFPGSDGPDASTGGRRVP 256
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2329 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2357


>AL589763-1|CAH72043.1|  269|Homo sapiens novel protein protein.
          Length = 269

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 255 GTRRPPVDASGPSEPGK*GCPSSRPSALSGA 163
           G   PP  A G S PG    PSSRP +  GA
Sbjct: 46  GASSPPRPAQGSSSPGIQSGPSSRPGSPRGA 76


>AL356512-1|CAH70642.1|  269|Homo sapiens novel protein protein.
          Length = 269

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -2

Query: 255 GTRRPPVDASGPSEPGK*GCPSSRPSALSGA 163
           G   PP  A G S PG    PSSRP +  GA
Sbjct: 46  GASSPPRPAQGSSSPGIQSGPSSRPGSPRGA 76


>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
          Length = 3336

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 170  DKADGRELGHPYFPGSDGPDASTGGRRVP 256
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2340 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2368


>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
          Length = 3284

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 170  DKADGRELGHPYFPGSDGPDASTGGRRVP 256
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2367 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2395


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,243,449
Number of Sequences: 237096
Number of extensions: 1113503
Number of successful extensions: 4616
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4575
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)