Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14m12f
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 38 0.005
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 38 0.005
U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin fam... 36 0.018
U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin fam... 33 0.22
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 32 0.30
U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine rece... 30 1.2
Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical pr... 28 6.4
AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine re... 28 6.4
Z81557-2|CAB04536.1| 354|Caenorhabditis elegans Hypothetical pr... 27 8.4
U39653-4|AAL56624.1| 649|Caenorhabditis elegans Prion-like-(q/n... 27 8.4
AF016443-12|AAC24279.2| 340|Caenorhabditis elegans Seven tm rec... 27 8.4
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/176 (24%), Positives = 80/176 (45%)
Frame = +1
Query: 103 LESQIYCIKYTLFCFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQKYFIGIYIMLI 282
+E + +KY LF N+VLW+ G+S+ + + + F+ + IL ++ I +++I
Sbjct: 2 VEGGVTIVKYLLFLANLVLWVGGLSL--IIVGSILQLKFDNVLDILGDERLATPILLLVI 59
Query: 283 ASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQPLIR 462
SL ++ FLGC A+ EN L + LAL + I A V++ ++ +DS +
Sbjct: 60 GSL-CTLLGFLGCCGAIRENYCLTVSF-AVLLALLITCEI-AAVIIGYALHDSFRLGIGN 116
Query: 463 NVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMDYINLNKPLPSECRDSVTGXA 630
+ ++ + G + CCG D++ S C + + G A
Sbjct: 117 QLQTGMVRYHESRGVESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEEIEGCA 172
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Frame = +1
Query: 106 ESQIYC-IKYTLFCFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQKYFIGIYIMLI 282
ES+I C +KY++F FNV+ +L G + +W E M + Y + +LI
Sbjct: 31 ESEISCCVKYSVFSFNVIFFLLGFGLLLFGVWAQIEKNTFVNMLSKASKLYLDPTWPLLI 90
Query: 283 ASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDF--STYDSSIQPL 456
++ F GC +L EN + L Y + L L + A V D+ I+ L
Sbjct: 91 VGFLTFIIGFSGCVGSLRENTSFLTFY-STLLGLLLIAEFSAGVFAYACRDQLDNYIRNL 149
Query: 457 IRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMDY 573
+ +V+V ++P + ++ +QE CCG +G D+
Sbjct: 150 LNDVVVGYRDDPD---LQLLIDSMQETWMCCGINGADDW 185
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 48.0 bits (109), Expect = 6e-06
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 5/162 (3%)
Frame = +1
Query: 109 SQIYCIKYTLFCFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQK---YFIGIYIML 279
S + ++ F FN WL GV VF L +W+ F+P +++ + ++G +++
Sbjct: 3 SCVNALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVG 62
Query: 280 IASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQPLI 459
++ I++V + GC A N L + L L F + A V L I+ +
Sbjct: 63 AGAI-IILVGYFGCIGAWKMNQCAL-AFFCCILILAFFLELAAAVTLFHK--QEHIKHYV 118
Query: 460 RNVIVRLINN--PQHDGSREILRMVQEGIGCCGADGPMDYIN 579
+ + I N ++ VQE CCG D+++
Sbjct: 119 ESSMYDTIRNRYSSETAFKDAFDTVQEKFECCGVKTYTDWLS 160
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +1
Query: 268 YIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSI 447
Y+ L+ ++V FLG A+ + LL ++ + F+ + + L + S+
Sbjct: 28 YVSLVCGCAQLLVGFLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKVYSV 87
Query: 448 QPLIRNVIVR----LINNPQHDGSREILRMVQEGIGCCGADGPMDYIN 579
+ +R ++ + + P++ E + +Q CCG+ GP DYI+
Sbjct: 88 KENVREIVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYIS 135
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 38.3 bits (85), Expect = 0.005
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 11/171 (6%)
Frame = +1
Query: 127 KYTLFCFNVVLWLFGVSVFALCLWICFEPGFNEWMR----------ILELQKYFIGIYIM 276
KY +F N+V + G + A+ +W+ + F ++ E F YI+
Sbjct: 58 KYGIFTANIVFLIVGGLLLAMGVWLRTDSRFRNFISERYRQAVQEAFWEAPTLFAFSYII 117
Query: 277 LIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGL-IGACVVLDFSTYDSSIQP 453
++ +MVVA LGC + L Y L V L G ++ D +
Sbjct: 118 IVLGAVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLSCGIYLLYKKDGLDVELSD 177
Query: 454 LIRNVIVRLINNPQHDGSREILRMVQEGIGCCGADGPMDYINLNKPLPSEC 606
+ ++ P +E L +Q CCG G D+ + +P C
Sbjct: 178 ALNYMVQHYYQGP--GVVQESLDHLQTAFRCCGNAGCSDFRVFRQDIPRSC 226
>U41028-2|AAA82355.1| 233|Caenorhabditis elegans Tetraspanin family
protein 9 protein.
Length = 233
Score = 36.3 bits (80), Expect = 0.018
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Frame = +1
Query: 121 CIKYTLFCFNVVLWLFGVSVFALCLWICFEPGF----NEWMR---------ILELQKYFI 261
CIK F N + +FG + LW + F ++++R + E+ +Y
Sbjct: 7 CIKLLFFVINFFICIFGALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAEYQA 66
Query: 262 GIYIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACV--VLDFSTY 435
++I++ + +V F GC A E+ LL +I + L L GA V + + +
Sbjct: 67 SLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVEL-GATVFAMTNREEF 125
Query: 436 DSSIQPLIRNVIVRLINNPQHDGSREILRMVQEGIGCCGA 555
SSIQ +++ ++ ++ R+ ++ +Q CCGA
Sbjct: 126 VSSIQQVLKK------SSATYE-LRKNIKPIQNVFQCCGA 158
>U28740-6|AAA68322.4| 317|Caenorhabditis elegans Tetraspanin family
protein 11 protein.
Length = 317
Score = 32.7 bits (71), Expect = 0.22
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 30/182 (16%)
Frame = +1
Query: 124 IKYTLFCFNVVLWLFGVSVFALCLWICFEP--------------GFNEWMRILELQKYFI 261
+K++LF FN+V L G+ + LW+ + G+++ + +L
Sbjct: 18 LKFSLFIFNLVFLLCGLICLGIGLWLVLDKYAIDNLAFATAKVQGYDQDAGLRDLATKPT 77
Query: 262 GI----YIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACV--VLD 423
+ Y++ + ++VVAFLGC A E LL Y S L L + I A + L
Sbjct: 78 AVRQFGYLLFVGGFIVIVVAFLGCCGAAKEWRPLLCCY-SSCLMLILAIQIAATIYAFLH 136
Query: 424 FSTYDSSIQPLIRNVI--------VRLINNPQHDG--SREILRMVQEGIGCCGADGPMDY 573
+++ + ++ + + +++ NNPQ DG + + CCG D +
Sbjct: 137 SHMFENDFRDILHSSLKMYNGTDNMKVSNNPQ-DGLLVKTAWDKIMIEKSCCGVDSKIGE 195
Query: 574 IN 579
N
Sbjct: 196 FN 197
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.30
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 17/158 (10%)
Frame = +1
Query: 136 LFCFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQK----------------YFIGI 267
LF N+ L G +V AL LWI F+ GF +R L+ +
Sbjct: 12 LFFLNLAQTLVGFTVIALTLWIRFDKGFESEIRTNILRDNDPEPLAGVKSDIRTGIIVSF 71
Query: 268 YIMLIASLGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSI 447
+I++ ++ +++ F+G A++ + LL Y + LF+ + VL S+
Sbjct: 72 WIIIGFAIANVIIGFVGVIGAVIRSKYLLAPYFLFMVILFLLEIAIGITVL---VKRRSV 128
Query: 448 QPLIRNVIVRLIN-NPQHDGSREILRMVQEGIGCCGAD 558
+ ++ + N N Q D S R CCGA+
Sbjct: 129 RRTVKEYVFDSFNMNAQADISAFNFR-----YNCCGAE 161
>U55373-2|AAX88832.1| 349|Caenorhabditis elegans Serpentine
receptor, class h protein76, isoform b protein.
Length = 349
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Frame = +1
Query: 115 IYCIKYTLF-CFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQK-YFIGIYIMLIAS 288
IY + +F C V LF F ++ F + R +ELQK +FIGI I ++
Sbjct: 213 IYMVSMLIFLCSTFVQLLF--YAFTCLRYLVFSKSSSFSKRTIELQKKFFIGILIQVLVP 270
Query: 289 LGIMVVAFLGCGSALMENVTLLYGYIGSQLALFVFGLIGACVVLDFSTYDSSIQPLIRNV 468
+V + C ++ N Y + + + VF G + + ++ R +
Sbjct: 271 YAFIVPSVSYCCYSVYSN---YYNQMLNNFFVLVFNFYGTVSTIGLISCHTAYWKFARKL 327
Query: 469 IV 474
I+
Sbjct: 328 IM 329
>Z68220-5|CAA92490.2| 282|Caenorhabditis elegans Hypothetical
protein T20D3.8 protein.
Length = 282
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 121 CIKYTLFCFNVVLWLFGVSVFALCLWICF 207
C+ T+FCF + ++ +S F+L L ICF
Sbjct: 215 CLSSTIFCFLSLFSIYCISDFSLELSICF 243
>Z70036-5|CAO78725.1| 712|Caenorhabditis elegans Hypothetical
protein T01B4.2c protein.
Length = 712
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 313 LGCGSALMENVTLLYGYIGSQLALFVFGLIG 405
L C + L T++YG IG L LFV + G
Sbjct: 225 LACKTNLGRVATIIYGLIGIPLMLFVLKIFG 255
>Z70036-4|CAO78724.1| 733|Caenorhabditis elegans Hypothetical
protein T01B4.2b protein.
Length = 733
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 313 LGCGSALMENVTLLYGYIGSQLALFVFGLIG 405
L C + L T++YG IG L LFV + G
Sbjct: 246 LACKTNLGRVATIIYGLIGIPLMLFVLKIFG 276
>Z70036-3|CAA93876.1| 757|Caenorhabditis elegans Hypothetical
protein T01B4.2a protein.
Length = 757
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 313 LGCGSALMENVTLLYGYIGSQLALFVFGLIG 405
L C + L T++YG IG L LFV + G
Sbjct: 270 LACKTNLGRVATIIYGLIGIPLMLFVLKIFG 300
>AC006744-1|AAF60506.2| 328|Caenorhabditis elegans Serpentine
receptor, class t protein52 protein.
Length = 328
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/93 (23%), Positives = 43/93 (46%)
Frame = +1
Query: 157 LWLFGVSVFALCLWICFEPGFNEWMRILELQKYFIGIYIMLIASLGIMVVAFLGCGSALM 336
L ++G SV A L+ C ++W L Q+ F+G+ I++I + I+ + ++ C A+
Sbjct: 4 LLIYG-SVQANPLYNCSAKPASQWTDELGTQRIFLGV-ILIIFGI-IVEILYVPCLGAIY 60
Query: 337 ENVTLLYGYIGSQLALFVFGLIGACVVLDFSTY 435
+ L + L + ++ C S Y
Sbjct: 61 KKKLLQHSCYKIMFLLGITDMLTTCTATILSGY 93
>Z81557-2|CAB04536.1| 354|Caenorhabditis elegans Hypothetical
protein F59A1.4 protein.
Length = 354
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 142 CFNVVLWLFGVSVFALCLWICFEPGFNEWMRILELQKYFIGIYIMLIASL-GIMVVAFLG 318
C +++ L + F L +C W++ E+ K+FI I I ++ L + FLG
Sbjct: 96 CSGIIISLLAIHFFYRYLAVCNNQA---WLQHFEMPKFFIWISIFVLFGLEWYLATLFLG 152
>U39653-4|AAL56624.1| 649|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform b protein.
Length = 649
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 303 GRVPRMRVGTDGKRNTFIRLHWVTVSFVCVWADR 404
GR+ D KR+ I H+ + VCVW D+
Sbjct: 188 GRIRATSYSCDIKRSGLISAHFASNDTVCVWNDQ 221
>AF016443-12|AAC24279.2| 340|Caenorhabditis elegans Seven tm
receptor protein 229 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 118 YCIKYTLFCFNVVLWLFGVSVFALCLWICFEPGF 219
+C +Y N W+ G+ V LC W+C P F
Sbjct: 111 FCFRYLTITKNN-RWVSGIPV--LCFWLCIPPFF 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,015,363
Number of Sequences: 27780
Number of extensions: 361319
Number of successful extensions: 1066
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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