Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14m07f
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 47 1e-05
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 46 3e-05
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 40 0.001
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 40 0.002
06_01_0825 + 6233525-6233740,6234274-6234461,6234544-6234668,623... 40 0.002
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 40 0.002
09_06_0040 - 20432008-20432091,20432152-20432229,20432322-204329... 32 0.37
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654... 30 1.5
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 30 2.0
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 30 2.0
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 29 2.6
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 29 2.6
10_05_0093 - 9108883-9109068,9109156-9109248,9109363-9109441,910... 29 3.4
01_04_0145 + 16709023-16709468,16709789-16710040,16710121-167102... 29 3.4
06_02_0001 - 10431189-10432634 29 4.5
08_02_1248 - 25581974-25582975 28 7.9
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 7.9
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYH-GINAQYGIIGVPTL 652
D + VLFYA CPFS P+F L+ +P+++ A + I ++YGI G PTL
Sbjct: 78 DYIAVLFYASWCPFSQECKPNFEILASLFPSIRHFAFEESSIRPSIISRYGIHGFPTL 135
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALK-YHGINAQYGIIGVPTL 652
+C VLFYA CPFS P F+ LS +P +K +AV+ + ++YG+ P++
Sbjct: 79 ECTAVLFYASWCPFSQRMRPVFDDLSSMFPRIKHLAVEQTNAMPAVLSRYGVRSFPSI 136
>03_06_0376 +
33479776-33479958,33481055-33481236,33481345-33481469,
33481858-33482057,33482629-33482762,33483095-33483158,
33483764-33484441,33484723-33484839
Length = 560
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 494 VLFYARACPFSAHAAPHFNALSRSYPNVKMVAV-DALKYHGINAQYGIIGVPTL 652
VLFYA CPFS+ P F ALS +P + V ++ + ++YG+ G P +
Sbjct: 82 VLFYAAWCPFSSKFRPIFEALSTMFPQIYHFTVEESSAMPSLFSRYGVRGFPAI 135
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +2
Query: 476 EADCVLVLFYARACPFSAHAAPHFNALSRSY---PNVKMVAVDALKYHGINAQYGIIGVP 646
E VLV FYA C H AP + L+ Y V + +DA K+ + +YG+ G P
Sbjct: 165 ETKDVLVEFYAPWCGHCKHLAPIYEKLASVYKQDEGVVIANLDADKHTALAEKYGVSGFP 224
Query: 647 TLK 655
TLK
Sbjct: 225 TLK 227
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 437 LLQINPDITTRDVEAD-CVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVA---VDALK 604
+L + ++V D LV FYA C AP + L S+ K V VD +
Sbjct: 32 VLALTESTFEKEVGQDRAALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDE 91
Query: 605 YHGINAQYGIIGVPTLK 655
+ + ++YG+ G PT++
Sbjct: 92 HKSVCSKYGVSGYPTIQ 108
>06_01_0825 +
6233525-6233740,6234274-6234461,6234544-6234668,
6234858-6234917,6235043-6235074
Length = 206
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYH-GINAQYGIIGVPTL 652
D VLFYA CPFS F L+ +P ++ +A++ +YGI G PTL
Sbjct: 91 DFAAVLFYASWCPFSQECRLRFEKLACIFPTIRHLAIEESTVRLRTRYRYGIHGYPTL 148
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 449 NPDITTRDVEADCVLVLFYARACPFSAHAAPHFNALSRSYP---NVKMVAVDALKYHGIN 619
N D D D +LV FYA C H AP + L+ Y V + +DA K+ +
Sbjct: 128 NFDSIVLDENKD-ILVEFYAPWCGHCKHLAPIYEKLASVYKLDDGVVIANLDADKHKDLA 186
Query: 620 AQYGIIGVPTLK 655
+YG+ G PTLK
Sbjct: 187 EKYGVSGYPTLK 198
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 503 YARACPFSAHAAPHFNALSRSYPNVKMV---AVDALKYHGINAQYGIIGVPTLK 655
Y C AP + L S+ K V VD ++ + ++YG+ G PT++
Sbjct: 26 YLVRCGHCKKLAPEYEKLGASFKKAKSVFIAKVDCDEHKSVCSKYGVSGYPTIQ 79
>09_06_0040 -
20432008-20432091,20432152-20432229,20432322-20432941,
20433042-20433108,20433276-20433291,20433781-20433887,
20433989-20434037,20435059-20435142,20435288-20435384,
20435914-20435985,20436075-20436435,20437864-20438259
Length = 676
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 194 QLEDVPNVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENK 322
++EDVPN+ E L+ V V TL +L+ ++ AE+K
Sbjct: 537 EVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDK 579
>03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,
6541815-6543215,6543268-6543357,6543800-6544515,
6545549-6545707,6545877-6546186,6546794-6546861,
6547354-6547896
Length = 1247
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +2
Query: 242 NVVSDVNKTLTNLYNTMTLANVTAENKTQNVNETRKLVKCKEIVYDVSEEVEPTVELINA 421
N S +KTL L + AN+T+ K+ + E R+ + +I ++V+ V++ +
Sbjct: 998 NRFSSASKTLHTLVSPEEDANLTSNRKSLSFVERRRFLYLSKIAAAAGKDVDYEVKVAHI 1057
Query: 422 TYLGKLLQINPDITTRDVE 478
++L + +I D E
Sbjct: 1058 DADIRILNLQEEIVQHDPE 1076
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 437 LLQINPDITTRDV--EADCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVA-VDALKY 607
+LQ NP+ V VLV F+A C P + + V VA +DA +
Sbjct: 31 VLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAH 90
Query: 608 HGINAQYGIIGVPTLK 655
+ +YGI G PT+K
Sbjct: 91 KELAQEYGIRGFPTIK 106
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFN----ALSRSYPNVKMVAVDALKYHGINAQYGIIGVPT 649
D + V FYA C AP + L+ + + V+A KY + ++YG+ G PT
Sbjct: 60 DYLFVDFYAPWCGHCKRLAPELDEAAPVLAGLSEPIIVAKVNADKYRKLGSKYGVDGFPT 119
Query: 650 L 652
L
Sbjct: 120 L 120
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 443 QINPDITTRDV--EADCVLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVD 595
Q N D T +V V++ F A C +AAP F LS YP++ V+VD
Sbjct: 630 QKNWDNTMEEVAEHGKTVVLKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSVD 682
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 431 GKLLQINPDITTRDVEADCVLVL-FYARACPFSAHAAPHFN----ALSRSYPNVKMVAVD 595
G++L+++ V A +L + FYA C AP + L+ + + V+
Sbjct: 46 GRVLELDDGNFDAAVRAAGLLFVDFYAPWCGHCKRLAPQLDEAAPVLAGLSTPIVVAKVN 105
Query: 596 ALKYHGINAQYGIIGVPTL 652
A KY + ++YG+ G PTL
Sbjct: 106 ADKYKKLGSKYGVDGFPTL 124
>10_05_0093 -
9108883-9109068,9109156-9109248,9109363-9109441,
9109529-9109639,9109715-9109857,9110050-9110522,
9110568-9111075,9111241-9111810,9111883-9112119,
9112196-9112465
Length = 889
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 110 YKHTSYVYYLQIVNYLYKFFQ 48
Y HT Y ++LQI+ Y Y +++
Sbjct: 757 YSHTMYRHFLQILQYAYNYYK 777
>01_04_0145 +
16709023-16709468,16709789-16710040,16710121-16710231,
16710319-16710379,16710481-16710573,16710651-16710836
Length = 382
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = -3
Query: 179 HHIVLLL---ELNILIKPPQDLHSSLYKHTSYVYYLQIVNYLYKFFQ 48
H+I LL+ + +++ P D YKH SY +L I+ Y+Y++++
Sbjct: 235 HYICLLIHPKDGTVVVLDPLD-----YKHQSYKEFLTILQYVYQYYK 276
>06_02_0001 - 10431189-10432634
Length = 481
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 398 PTVELINATYLGKLLQINPDITTRDV-EADCVLVLFYARACPFSAHAAPHFNALSRSYPN 574
P V + + +G LLQ I + D +V + SA A HF AL R YP+
Sbjct: 21 PHVVFVPSAGMGHLLQFFRFIGALSAHDVDISVVTVFPTV---SAAEADHFAALFRDYPS 77
Query: 575 VKMVAVDALKY 607
V+ + D L +
Sbjct: 78 VRRLDFDLLPF 88
>08_02_1248 - 25581974-25582975
Length = 333
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +2
Query: 374 YDVSEEVEPTVELINATY------LGKLLQINPDITTRDVEADCVLVLFYARACPFSAHA 535
Y V + + PT E + + L +++ PDI +RDV+ L + ++C FS
Sbjct: 184 YSVDKRLRPTAEFLKSAVGLEGSNLQRVIMSFPDILSRDVDKILRPNLAFLQSCGFS--- 240
Query: 536 APHFNALSRSYPNVKMVAV 592
AL YP V + +V
Sbjct: 241 KDQVMALVAGYPPVLIKSV 259
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 266 TLTNLYNTMTLANVTAENKTQNVNETRKLVKCKEIVYDVSE-EVEPTVELINATYLGKLL 442
T L + T +TAE + + T K+V+ KE+ + +E E V++ T K++
Sbjct: 918 TAEALADKTTEGEITAEVQVEETTTTEKIVEDKELAEETTEGETTAEVQVAETTSTEKIV 977
Query: 443 Q 445
+
Sbjct: 978 E 978
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,385,489
Number of Sequences: 37544
Number of extensions: 261398
Number of successful extensions: 628
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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