Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14m07f
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70270-6|CAA94226.2| 323|Caenorhabditis elegans Hypothetical pr... 61 6e-10
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 33 0.14
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 33 0.14
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 33 0.14
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 31 0.76
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.8
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.8
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 30 1.8
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 30 1.8
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 30 1.8
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 30 1.8
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 29 2.3
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80028-1|AAN73865.1| 369|Caenorhabditis elegans Serpentine rece... 28 7.1
U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z70270-6|CAA94226.2| 323|Caenorhabditis elegans Hypothetical
protein C53D6.4 protein.
Length = 323
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +2
Query: 491 LVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDA---LKYHGINAQYGIIGVPTL 652
LV+F++ +CPFSA AP+FN ++ SY N+ VA+DA K H +N +YG+ G PT+
Sbjct: 117 LVMFHSPSCPFSARLAPYFNEIAGSYTNILPVAIDASDFTKSHRLNFRYGVSGTPTI 173
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLK 655
VLV FYA C H AP + S S ++ + VDA + ++ I G PTLK
Sbjct: 56 VLVKFYAPWCGHCKHLAPEYEKAS-SKVSIPLAKVDATVETELGKRFEIQGYPTLK 110
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYP----NVKMVAVDALKYHGINAQYGIIGVPT 649
+ VLV FYA C AP + ++ VK+ VDA + +YG+ G PT
Sbjct: 165 ELVLVEFYAPWCGHCKKLAPEYEKAAQKLKAQGSKVKLGKVDATIEKDLGTKYGVSGYPT 224
Query: 650 LK 655
+K
Sbjct: 225 MK 226
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNA----LSRSYPNVKMVAVDALKYHGINAQYGIIGVPT 649
D LV FYA C AP + L+ + P V +V VD + ++G+ G PT
Sbjct: 38 DIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPT 97
Query: 650 LK 655
LK
Sbjct: 98 LK 99
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 395 EPTVELINATYLGKLLQINPDITTRDVEADCVLVLFYARACPFSAHAAPHFNALSRSYPN 574
+ VEL A + K+ IN D D +V FYA C P + + +
Sbjct: 24 DDVVELTEANFQSKV--INSD--------DIWIVEFYAPWCGHCKSLVPEYKKAASALKG 73
Query: 575 V-KMVAVDALKYHGINAQYGIIGVPTLK 655
V K+ AVD ++ + Y + G PTLK
Sbjct: 74 VAKVGAVDMTQHQSVGGPYNVQGFPTLK 101
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNA----LSRSYPNVKMVAVDALKYHGINAQYGIIGVPT 649
D LV FYA C AP + L+ + P V +V VD + ++G+ G PT
Sbjct: 38 DIALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVDCTTEKTVCDKFGVKGFPT 97
Query: 650 LK 655
LK
Sbjct: 98 LK 99
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYHGINAQYGIIGVPT 649
V V F A C + AP F+ L+ Y + VD + G A YG+ +PT
Sbjct: 24 VFVDFTASWCGPCQYIAPIFSDLANQYKGSVFLKVDVDECRGTAATYGVNAMPT 77
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 LVLFYARACPFSAHAAPHFNALSRSYPNVKMV-AVDALKYHGINAQYGIIGVPTLK 655
+V FYA C P + ++ + + A+DA + I +Y I G PT+K
Sbjct: 46 IVEFYAPYCGHCKSLVPEYKKAAKLLKGIAEIGAIDATVHQKIPLKYSIKGYPTIK 101
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 491 LVLFYARACPFSAHAAPHFN-ALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLK 655
+V F+A C P + A VK A+DA + I ++GI G PT+K
Sbjct: 176 MVEFFAPWCGHCQKLEPEWKKAAEEMGGRVKFGALDATAHESIAQKFGIRGFPTIK 231
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHFNA----LSRSYPNVKMVAVDALKYHGINAQYGIIGVPTL 652
VLV FYA C AP ++ L ++K+ VDA + + +++ + G PT+
Sbjct: 43 VLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTI 101
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYPN-----VKMVAVDALKYHGINAQYGIIGVP 646
+ V V FYA C FS P F S + + + +VDA K + I +Y + P
Sbjct: 35 ELVFVNFYADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKYP 94
Query: 647 TLK 655
TLK
Sbjct: 95 TLK 97
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = +2
Query: 482 DCVLVLFYARACPFSAHAAPHFNALSRSYPN-----VKMVAVDALKYHGINAQYGIIGVP 646
+ V V FYA C FS P F S + + + +VDA K + I +Y + P
Sbjct: 35 ELVFVNFYADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKYP 94
Query: 647 TLK 655
TLK
Sbjct: 95 TLK 97
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHFNA----LSRSYPNVKMVAVDALKYHGINAQYGIIGVPTL 652
VLV FYA C AP ++ L ++K+ VDA + + +++ + G PT+
Sbjct: 43 VLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTI 101
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHF----NALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLK 655
+LV FYA C AP + L ++K+ +DA + +++++ + G PTLK
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLK 102
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHF----NALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLK 655
+LV FYA C AP + L ++K+ +DA + +++++ + G PTLK
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLK 102
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 488 VLVLFYARACPFSAHAAPHF----NALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTLK 655
+LV FYA C AP + L ++K+ +DA + +++++ + G PTLK
Sbjct: 43 ILVEFYAPWCGHCKSLAPEYAKAATQLKEEGSDIKLGKLDATVHGEVSSKFEVRGYPTLK 102
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +2
Query: 317 NKTQNVNETRKLVKCKEIVYDVSEEVEPTVELINATYLGKLLQI--NPDITTRDVEADCV 490
NK +N+ E V ++ + + + + +E+++ + GK ++ + ++D V
Sbjct: 29 NKLENLEEDDLEVIRRQRMEQMKKAQKDRIEMLSHGH-GKYEEVADEKEFFEATKKSDKV 87
Query: 491 LVLFYARACPFSAHAAPHFNALSRSYPNVKMVAVDALKYHGINAQYGIIGVPTL 652
+ LFY HF L+R + + + V+A K H + + I +P++
Sbjct: 88 VCLFYLPGNFRCKIVDKHFEILARKHVGTRFIHVNAEKVHFLTTRLNIRVIPSI 141
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 179 VSEETQLEDVPNVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENKTQNVNETRKLVK 358
+SEE + + N DE +L S V V + L L +V +EN + V + ++
Sbjct: 1 MSEEPAAKRMKNADEFPNLRSEVAGPVKEKLIELDAIQHQLDVMSENAAEEVLKVEQIFN 60
Query: 359 CKEI-VYDVSEEVEPTVE 409
K + +Y+ +++ ++
Sbjct: 61 QKRLPIYEKRKKLTTKID 78
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 179 VSEETQLEDVPNVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENKTQNVNETRKLVK 358
+SEE + + N DE +L S V V + L L +V +EN + V + ++
Sbjct: 1 MSEEPAAKRMKNADEFPNLRSEVAGPVKEKLIELDAIQHQLDVMSENAAEEVLKVEQIFN 60
Query: 359 CKEI-VYDVSEEVEPTVE 409
K + +Y+ +++ ++
Sbjct: 61 QKRLPIYEKRKKLTTKID 78
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 179 VSEETQLEDVPNVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENKTQNVNETRKLVK 358
+SEE + + N DE +L S V V + L L +V +EN + V + ++
Sbjct: 1 MSEEPAAKRMKNADEFPNLRSEVAGPVKEKLIELDAIQHQLDVMSENAAEEVLKVEQIFN 60
Query: 359 CKEI-VYDVSEEVEPTVE 409
K + +Y+ +++ ++
Sbjct: 61 QKRLPIYEKRKKLTTKID 78
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical protein
F36G3.1 protein.
Length = 964
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 212 NVDESESLLSNVVSDVNKTLTNLYNTMTLANVTAENK 322
+V+ E+LLS ++SD + L N+YN + ++T + +
Sbjct: 915 DVEAREALLSFILSDRHNQLANIYNIGRILDLTPQEE 951
>Z46242-9|CAA86334.2| 491|Caenorhabditis elegans Hypothetical
protein F35G12.12 protein.
Length = 491
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -1
Query: 442 KQFSQIR-CIYKFYCWLYLF*DIIHNLFTFNEF 347
K F +++ CIY F+ L+ + ++H TF F
Sbjct: 391 KPFPEMKNCIYDFWQQLFTYPSVVHQFITFQGF 423
>U80028-1|AAN73865.1| 369|Caenorhabditis elegans Serpentine
receptor, class w protein138 protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 327 CVLFSAVTFASVIXXXXXXXXXLTSDTTLESNDSDSST 214
CVLF AVTF V+ +T +NDS +T
Sbjct: 231 CVLFPAVTFLLVVELWKSDKKRKNLSSTANANDSRKTT 268
>U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical
protein T20D4.9 protein.
Length = 459
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 188 ETQLEDVPNVDESE--SLLSNVVSDVNKTLTNLYNTMTLANVTAENK 322
ET E + + SE S + + +VN TLTN++ AN+ N+
Sbjct: 79 ETHYEYIKKKNNSEKFSFMVETLKNVNLTLTNIFYNSLYANIEVLNQ 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,001,765
Number of Sequences: 27780
Number of extensions: 266208
Number of successful extensions: 865
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -