Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14l09f
(599 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 136 1e-32
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 129 2e-30
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 127 8e-30
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 102 2e-22
11_04_0388 + 17076157-17076254,17076762-17076813,17077672-170778... 77 1e-14
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 46 3e-05
03_06_0476 + 34199577-34199638,34200267-34200397,34200535-342006... 43 2e-04
06_01_1006 + 7836366-7836460,7836568-7836626,7836877-7836961,783... 40 0.001
07_03_0951 - 22836167-22836358,22836455-22837213 33 0.13
11_01_0366 + 2793732-2793838,2793944-2794979 31 0.70
03_01_0363 + 2827990-2828055,2828215-2829306,2829715-2829837,282... 29 2.8
07_01_1060 + 9330217-9330219,9330490-9330561,9330773-9330917,933... 29 3.8
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 28 6.6
07_01_1064 + 9385330-9385432,9386181-9386236,9386938-9387082,938... 28 6.6
03_05_1051 + 29978655-29979875 28 6.6
03_01_0232 + 1824517-1825506 28 6.6
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 27 8.7
06_03_1188 + 28269231-28270358 27 8.7
05_05_0305 - 23970692-23970825,23972323-23973703 27 8.7
>03_02_0665 -
10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 136 bits (330), Expect = 1e-32
Identities = 78/165 (47%), Positives = 102/165 (61%), Gaps = 10/165 (6%)
Frame = +3
Query: 132 ADNSVDPPAKKRKLNT----------GEAHSNNSAMANNGARVEDEIDESLYSRQLYVLG 281
A++S D PAKK ++ GEA ++ NG+ V EIDE L+SRQL V G
Sbjct: 127 AESSSDAPAKKARVGASASEAEAMVAGEAGGGGGGVSGNGSEVA-EIDEDLHSRQLAVYG 185
Query: 282 HDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVI 461
+ MRR+ +S+VL+SGL GLG EIAKN+ L GVKS+TLHD N + DLS F+LSE I
Sbjct: 186 RETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSGNFFLSEDDI 245
Query: 462 GQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLTGAS 596
G+NRA+ +L ELN+ V + T LT + L KF+ VV T S
Sbjct: 246 GKNRAVACTAKLQELNNAVLISTLTEDLTNEHLSKFQAVVFTDIS 290
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 129 bits (311), Expect = 2e-30
Identities = 63/113 (55%), Positives = 84/113 (74%)
Frame = +3
Query: 237 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 416
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSVTLHDD N
Sbjct: 78 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVTLHDDDNVE 137
Query: 417 VADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRV 575
+ DLSS F+L+E +GQNRA T ++L ELN+ V + TG LT++ L F++
Sbjct: 138 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQL 190
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 127 bits (306), Expect = 8e-30
Identities = 62/113 (54%), Positives = 83/113 (73%)
Frame = +3
Query: 237 EIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCT 416
EIDE L+SRQL V G + M+R+ +S+VL+SGL GLG EIAKN++L GVKSV LHDD N
Sbjct: 155 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVE 214
Query: 417 VADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRV 575
+ DLSS F+L+E +GQNRA T ++L ELN+ V + TG LT++ L F++
Sbjct: 215 LWDLSSNFFLTEKDVGQNRAQTCVQKLQELNNAVIISTITGDLTKEQLSNFQL 267
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 102 bits (245), Expect = 2e-22
Identities = 75/178 (42%), Positives = 94/178 (52%), Gaps = 33/178 (18%)
Frame = +3
Query: 153 PAKKRKLNTGEAHSNNSA---MANNGAR---VEDEIDESLYSRQLYVLGHDAMRRMASSD 314
P KR T + + +A NG+ V EIDE L+SRQL V G + MRR+ +S
Sbjct: 16 PTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASH 75
Query: 315 VLISGLGGLGV-------------------EIA--------KNVILGGVKSVTLHDDKNC 413
VL+SGL GLG +IA KN+ L GVKSVTLHD KN
Sbjct: 76 VLVSGLNGLGAEIGSSFYPLTLFVLCFFLFQIAFNCLLITTKNLALAGVKSVTLHDVKNV 135
Query: 414 TVADLSSQFYLSETVIGQNRALTSCEQLSELNHYVPTTAYTGPLTEDFLRKFRVVVLT 587
+ DLS+ F+LSE IG+NRA +L ELN+ V +A T LT D L KF+ VV T
Sbjct: 136 EMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLVSALTEELTTDHLSKFQAVVFT 193
>11_04_0388 +
17076157-17076254,17076762-17076813,17077672-17077867,
17078242-17078321,17078465-17078581,17078895-17078950,
17079238-17079268,17079292-17079342,17080411-17080477,
17080621-17080724,17080802-17080909,17081874-17081987
Length = 357
Score = 77.0 bits (181), Expect = 1e-14
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Frame = +3
Query: 219 GARVEDEI---DESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSV 389
G E+E+ + +LY RQ+ V G DA +R++ + VL+ G+ G E KN++L GV S+
Sbjct: 4 GGGAEEELTAQETALYDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSL 63
Query: 390 TLHDDKNCTVADLSSQFYL--SETVI-GQNRALTSCEQLSELNHYVPTTAYTGP---LTE 551
+L DD T DL++ F + E++ G++RA CE L + N V G +
Sbjct: 64 SLMDDHLVTEDDLNANFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKGDPSLIDG 123
Query: 552 DFLRKFRVVVLTGA 593
+FL KF ++V++ A
Sbjct: 124 EFLDKFDIIVVSCA 137
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/97 (24%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Frame = +3
Query: 306 SSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQFYLSETVIGQNRALTS 485
++ VL+ G GG+G E+ K + L G + + + D V++L+ QF ++ +GQ++A +
Sbjct: 17 AAKVLMVGAGGIGCELLKTLALSGFRDIHIIDLDTIEVSNLNRQFLFRQSHVGQSKAHVA 76
Query: 486 CEQLSELNHYVPTTAYTGPLTE-----DFLRKFRVVV 581
+ + + + T+Y + + +F ++F VV+
Sbjct: 77 RDAVLKFRPNINITSYHANVKDAQFNVEFFKQFNVVL 113
>03_06_0476 +
34199577-34199638,34200267-34200397,34200535-34200698,
34201007-34201117,34201308-34201387,34201489-34201639,
34201736-34201829,34202421-34202509,34203672-34203745,
34203859-34204021,34204445-34204530,34205011-34205094,
34205186-34205366,34205837-34205887
Length = 506
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 YSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHD-DKNCTVADLS 431
Y RQL + G + + + + G G E KN++LGGV SVT+ D D C
Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGTEAMKNLVLGGVGSVTVVDVDAEC------ 69
Query: 432 SQFYLSETVIGQNRALTSCEQLSELNHYV 518
+GQ+RA + C L ELN V
Sbjct: 70 ---------LGQSRAKSVCSFLQELNDAV 89
>06_01_1006 +
7836366-7836460,7836568-7836626,7836877-7836961,
7837349-7837496,7837774-7837986,7838403-7838537,
7838659-7838790,7838884-7839099,7839212-7839336,
7839787-7839844,7839977-7840087
Length = 458
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +3
Query: 228 VEDEIDESLYSRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDK 407
++DE+ +R + G ++ +++ S V++ GLGG+G A ++ GV + L D
Sbjct: 69 LDDEVVSEQLTRNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFD 128
Query: 408 NCTVADLSSQFYLSETVIGQNRAL 479
+++ L+ + +G +AL
Sbjct: 129 QVSLSSLNRHAVATRDDVGTPKAL 152
>07_03_0951 - 22836167-22836358,22836455-22837213
Length = 316
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/82 (32%), Positives = 36/82 (43%)
Frame = -2
Query: 355 AISTPKPPRPDIRTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPV 176
A+S P P P +S RR SW S R + S+ S T AP +ELF S
Sbjct: 61 ALSPPPTPTPSQPSSSYHRRRRESWESAAGSRHTSIRSVGSDT-AP----SELFPTMSRE 115
Query: 175 FSFRFFAGGSTELSATSALDIG 110
FS A + +A +A + G
Sbjct: 116 FSAMVAAAANANAAAAAAANGG 137
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 264 QLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGG-VKSVTL 395
+L + HD R ++ VL+ G G +GVE+A +++ K VTL
Sbjct: 115 RLQMFEHDKARIASAGSVLVVGGGPIGVELAAEIVMASPEKRVTL 159
>03_01_0363 +
2827990-2828055,2828215-2829306,2829715-2829837,
2829994-2830110,2830248-2830429,2830558-2830744,
2830846-2831055,2831177-2831305,2832179-2832247,
2832751-2832873,2832957-2833007,2833101-2833250
Length = 832
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 258 SRQLYVLGHDAMRRMASSDVLISGLGGLGVEIAKNVILGGVKSVTLHDDKNCTVADLSSQ 437
S+QL V ++ + DVL + G IA ++ G VK L DK+ ++
Sbjct: 388 SKQLSVTNVKTLKM--NDDVLAVTISPTGNHIAVALLDGAVKFSNLEQDKHKQISIFRQS 445
Query: 438 FYLSETVIGQNRALTSCE 491
Y+ + +I N L SC+
Sbjct: 446 VYMGKAII-VNIFLASCK 462
>07_01_1060 +
9330217-9330219,9330490-9330561,9330773-9330917,
9331006-9331133,9331689-9331803,9331881-9331984,
9332356-9332568,9332637-9332657
Length = 266
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 315 VLISGLGGLGVEIAKNVILGGVK 383
VLI G G +GVEIAK + GVK
Sbjct: 117 VLILGFGAIGVEIAKRIRPFGVK 139
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 38 KQFEENFFLIVNATKILAKLCAF 106
K +EN F IVN +K + +LC F
Sbjct: 676 KSTDENLFTIVNDSKFMRRLCDF 698
>07_01_1064 +
9385330-9385432,9386181-9386236,9386938-9387082,
9387126-9387298,9388058-9388129,9388222-9388336,
9388418-9388521,9388604-9388645,9388932-9389144,
9389621-9389689
Length = 363
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 315 VLISGLGGLGVEIAKNVILGGVK 383
VLI G G +GVEIAK + GVK
Sbjct: 184 VLILGFGAIGVEIAKRLRPFGVK 206
>03_05_1051 + 29978655-29979875
Length = 406
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 240 FHLPRALHCSPLPSCSNALLLYL 172
FH R HCSP C N LL L
Sbjct: 156 FHRGRQFHCSPDAQCYNTLLAAL 178
>03_01_0232 + 1824517-1825506
Length = 329
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 319 RTSELAIRRIASWPST*SWREYRLSSISSSTRAPLFAIAELFECASPVFSFRFFAGGSTE 140
R S+ + R+AS S+R ++ S S A L CA+ S FFA G
Sbjct: 161 RRSDRDLSRLASTLRDLSYRSSSAAATSDSGEAALAEAVGAATCAAAAASASFFA-GLAS 219
Query: 139 LSATSA 122
SA+SA
Sbjct: 220 ASASSA 225
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 394 KVTDFTPPRITFFAISTPKPPRPDIRTS 311
K D PPR A S+P PP P +R S
Sbjct: 11 KPFDVYPPRPLAAAASSPPPPPPPLRVS 38
>06_03_1188 + 28269231-28270358
Length = 375
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 99 ARSCPM-SSAEVADNSVDPPAKKRKL-NTGE 185
A SC SS EV D++ PPAK+RK+ + GE
Sbjct: 291 AASCKRDSSEEVFDDAPAPPAKRRKVFDAGE 321
>05_05_0305 - 23970692-23970825,23972323-23973703
Length = 504
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 347 RNSEKRYPWWCKVGNFA*RQKLHRG*SFLAVLPFRD 454
RNSE+R+ + GN A + LHR V FRD
Sbjct: 290 RNSEERHDQKLERGNLALERSLHRKNEIRVVRGFRD 325
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,204,169
Number of Sequences: 37544
Number of extensions: 369468
Number of successful extensions: 1199
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -