Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14l02f
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical pr...   199   1e-51
AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical ...    66   1e-11
AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z92809-1|CAB07270.1|  286|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical
           protein C36B1.3 protein.
          Length = 282

 Score =  199 bits (486), Expect = 1e-51
 Identities = 95/170 (55%), Positives = 126/170 (74%), Gaps = 6/170 (3%)
 Frame = +1

Query: 127 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 306
           MPYANQP++ +TEL+++ +KFV+ DT+LSVANS+RRVF+AE PT+AIDWVQ+E N++VL 
Sbjct: 1   MPYANQPNIEVTELTNDIIKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLH 60

Query: 307 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 486
           DEF+AHR+GLIP ISD  V+K++Y+RDC C +FC ECS+ F L +KC DE T  VTT  L
Sbjct: 61  DEFIAHRMGLIPFISDYHVEKMQYTRDCECAEFCDECSIPFILQMKCKDEATLAVTTEHL 120

Query: 487 ---KSSDPRVVPVTS---RHRDEDQADYGEADEILIIKLRKGQELKLRAY 618
               + D  V P      R R   + ++   +EILI+KLRKGQEL L+AY
Sbjct: 121 MPMHNLDTTVRPACGKALRERGSTRDEFHNREEILIVKLRKGQELNLKAY 170


>AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical
           protein H43I07.2 protein.
          Length = 366

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
 Frame = +1

Query: 133 YANQPSVHITELSDENV--KFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 306
           Y +Q  V +   SD+ +  +F +   E  +AN++RRV IAE PTMA++ + L  N++V+ 
Sbjct: 50  YCDQIQVAMVNESDDGMTLEFDITRIEAPIANALRRVLIAEVPTMALEKIYLYQNTSVIQ 109

Query: 307 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVE----------FTLDVKCTDE 456
           DE L HR+GL+PL  D    +    +     +   +C  E          F ++V CT  
Sbjct: 110 DEVLCHRLGLLPLRVDPRGFQFPKEKVVGINEKGVDCDEEPEGDPAKNLIFKINVSCTKN 169

Query: 457 QTRHVTTADLK---------SSDPRVVPVTSRHRD--EDQADYGEADEILIIKLRKGQEL 603
           +    T  D K         S     VP+  +     E+      +D+IL+ KLR GQE+
Sbjct: 170 RNAVPTATDPKQLYHNSSVYSRAFEWVPIADQKTQFTEEAHPRMVSDDILVAKLRPGQEI 229

Query: 604 K 606
           +
Sbjct: 230 E 230


>AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.6 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 361 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTR 465
           +D  +Y+ D +C   CSEC         C D  TR
Sbjct: 79  IDNFKYNPDALCAGTCSECKTHTDKLRICVDCLTR 113


>Z92809-1|CAB07270.1|  286|Caenorhabditis elegans Hypothetical
           protein R17.1 protein.
          Length = 286

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
 Frame = -3

Query: 518 VTGTTLGSLDFKSAV--VTCLVCSSVHFTSNVNSTLHSEQKSTHMQSREYLILSTTSSDM 345
           V+  T+ S D++S +     L   ++HFTS    T H         + + L+LS  S  +
Sbjct: 95  VSQLTISSYDYQSIIEEFDSLNIETLHFTSPYMDTFHGNLLKRCSWNFDELLLSCFSPRV 154

Query: 344 SGMRPMRCAKNSSLKTVELASNCTQSMAIVGVSAINTRLIL 222
              + + C    ++   +  S   + + +  +S I    +L
Sbjct: 155 QDFQAVTCCNFKNIMIKQDESIKLEDLLVSNISEILMHTLL 195


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,340,955
Number of Sequences: 27780
Number of extensions: 279857
Number of successful extensions: 746
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)