Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14k13f
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical ...    31   0.90 
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AC024759-3|AAK68433.1|  355|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC024759-2|AAM97964.1|  376|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical ...    28   6.3  

>AC024759-4|AAK68434.1|  356|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.4 protein.
          Length = 356

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 186 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 272
           D+ H +SGL  TWLGH   ++   GV+++
Sbjct: 76  DDFHSESGLFATWLGHATVLVDLEGVKFV 104


>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
            T08G11.1b protein.
          Length = 3185

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 168  KDQDEAAGCEEDVELDVTRSPVL*GIGLVILSKFGMF*IRTDSYNVWRREWLPRYC 1
            KD D     E D E  VT + +   + L+I  +  +   RTD   VW+ EW   YC
Sbjct: 3076 KDTDRGELAETD-EF-VTYASISEKMVLIITDRRLVLSKRTDMMGVWQTEWGSEYC 3129


>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
            T08G11.1a protein.
          Length = 3212

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = -2

Query: 168  KDQDEAAGCEEDVELDVTRSPVL*GIGLVILSKFGMF*IRTDSYNVWRREWLPRYC 1
            KD D     E D E  VT + +   + L+I  +  +   RTD   VW+ EW   YC
Sbjct: 3103 KDTDRGELAETD-EF-VTYASISEKMVLIITDRRLVLSKRTDMMGVWQTEWGSEYC 3156


>AC024759-3|AAK68433.1|  355|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3a protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 186 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 272
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 74  DDFHSESDLFATWLGHATVLVDLEGVKFV 102


>AC024759-2|AAM97964.1|  376|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3c protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 186 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 272
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 95  DDFHSESDLFATWLGHATVLVDLEGVKFV 123


>AC024759-1|AAK73907.1|  376|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.3b protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 186 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 272
           D+ H +S L  TWLGH   ++   GV+++
Sbjct: 95  DDFHSESDLFATWLGHATVLVDLEGVKFV 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,818
Number of Sequences: 27780
Number of extensions: 257843
Number of successful extensions: 529
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)