Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14k06f
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063435-1|AAH63435.1|  428|Homo sapiens HCFC1 protein protein.        31   3.5  
BC030560-1|AAH30560.1|  551|Homo sapiens HCFC1 protein protein.        31   3.5  
BC019887-1|AAH19887.1|  551|Homo sapiens Unknown (protein for IM...    31   3.5  
BC033799-1|AAH33799.1|  792|Homo sapiens host cell factor C2 pro...    31   4.7  
BC006558-1|AAH06558.1|  412|Homo sapiens HCFC2 protein protein.        31   4.7  
AK223342-1|BAD97062.1|  792|Homo sapiens host cell factor C2 var...    31   4.7  
AF117210-1|AAD27814.1|  792|Homo sapiens host cell factor 2 prot...    31   4.7  

>BC063435-1|AAH63435.1|  428|Homo sapiens HCFC1 protein protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEKL 611
           + +  K    +  GG E + D+  V   +   W   +  G++PPG    G   DG +L
Sbjct: 37  RAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRL 94


>BC030560-1|AAH30560.1|  551|Homo sapiens HCFC1 protein protein.
          Length = 551

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEKL 611
           + +  K    +  GG E + D+  V   +   W   +  G++PPG    G   DG +L
Sbjct: 37  RAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRL 94


>BC019887-1|AAH19887.1|  551|Homo sapiens Unknown (protein for
           IMAGE:5142023) protein.
          Length = 551

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEKL 611
           + +  K    +  GG E + D+  V   +   W   +  G++PPG    G   DG +L
Sbjct: 37  RAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRL 94


>BC033799-1|AAH33799.1|  792|Homo sapiens host cell factor C2
           protein.
          Length = 792

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEK-LY 614
           + +  +    I  GG E + D+  V   +   W   +  G++PPG    G   DG + L 
Sbjct: 27  RAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILV 86

Query: 615 FG 620
           FG
Sbjct: 87  FG 88


>BC006558-1|AAH06558.1|  412|Homo sapiens HCFC2 protein protein.
          Length = 412

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEK-LY 614
           + +  +    I  GG E + D+  V   +   W   +  G++PPG    G   DG + L 
Sbjct: 27  RAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILV 86

Query: 615 FG 620
           FG
Sbjct: 87  FG 88


>AK223342-1|BAD97062.1|  792|Homo sapiens host cell factor C2
           variant protein.
          Length = 792

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEK-LY 614
           + +  +    I  GG E + D+  V   +   W   +  G++PPG    G   DG + L 
Sbjct: 27  RAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILV 86

Query: 615 FG 620
           FG
Sbjct: 87  FG 88


>AF117210-1|AAD27814.1|  792|Homo sapiens host cell factor 2
           protein.
          Length = 792

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +3

Query: 441 KVIPTKNACYISFGGEEVLKDQFEVLVPSMFAWQF-STNGEVPPGAVEAGSTADGEK-LY 614
           + +  +    I  GG E + D+  V   +   W   +  G++PPG    G   DG + L 
Sbjct: 27  RAVAIRELMIIFGGGNEGIADELHVYNTATNQWFLPAVRGDIPPGCAAHGFVCDGTRILV 86

Query: 615 FG 620
           FG
Sbjct: 87  FG 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,080,730
Number of Sequences: 237096
Number of extensions: 2149419
Number of successful extensions: 6255
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6242
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)