Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14j23f
(322 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118607-1|AAM49976.1| 676|Drosophila melanogaster LP07116p pro... 35 0.020
AE014297-4040|AAF56648.1| 676|Drosophila melanogaster CG6296-PA... 35 0.020
AY075095-1|AAL79357.1| 815|Drosophila melanogaster pygopus prot... 31 0.25
AY058500-1|AAL13729.1| 815|Drosophila melanogaster LD18280p pro... 31 0.25
AF457206-1|AAL91369.1| 815|Drosophila melanogaster pygopus prot... 31 0.25
AE014297-4758|AAF57161.1| 815|Drosophila melanogaster CG11518-P... 31 0.25
AY051489-1|AAK92913.1| 456|Drosophila melanogaster GH14572p pro... 31 0.44
AE013599-2436|AAF57889.1| 456|Drosophila melanogaster CG11395-P... 31 0.44
AE014298-2857|AAF48964.1| 2037|Drosophila melanogaster CG14200-P... 29 1.3
AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH0604... 29 1.8
AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA... 29 1.8
BT003467-1|AAO39470.1| 640|Drosophila melanogaster RE70810p pro... 28 3.1
AE014296-2127|AAF49930.2| 640|Drosophila melanogaster CG32105-P... 28 3.1
AE014298-1830|AAN09644.1| 582|Drosophila melanogaster CG32644-P... 27 4.1
AE014296-59|ABC66118.1| 423|Drosophila melanogaster CG34018-PA ... 27 4.1
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 27 4.1
AY095073-1|AAM11401.1| 184|Drosophila melanogaster RE21703p pro... 27 5.4
BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p pro... 26 9.4
AY118369-1|AAM48398.1| 707|Drosophila melanogaster RE11711p pro... 26 9.4
AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid horm... 26 9.4
AE014134-3332|AAX52674.1| 389|Drosophila melanogaster CG33509-P... 26 9.4
AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA... 26 9.4
>AY118607-1|AAM49976.1| 676|Drosophila melanogaster LP07116p
protein.
Length = 676
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +1
Query: 142 EESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
E STS TT PEEST T PEE + PEES++ T PE+ T+
Sbjct: 373 EVSTSTTTDKPEEST--TEEPEEDSTTNGKPEESSTTTEQPEDSTT 416
Score = 32.3 bits (70), Expect = 0.14
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 130 TIIPEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
T P ++ TT PEE T T P E + T PE+ST T +PEE T+
Sbjct: 528 TTSPSDADDSTTEEPEEDTTTTKKPVEPSTTTEEPEDST--TEVPEESTT 575
Score = 31.1 bits (67), Expect = 0.33
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 112 VESMLRTIIPEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
V + T PEEST T PEE + PEES+ T PE+ST+ T P + T+
Sbjct: 374 VSTSTTTDKPEEST---TEEPEEDSTTNGKPEESSTTTEQPEDSTTTTEEPIDSTT 426
Score = 27.9 bits (59), Expect = 3.1
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 139 PEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
PEE ++ T PEES+ T PE+ST T P +ST+ E TS
Sbjct: 391 PEEDST-TNGKPEESSTTTEQPEDSTTTTEEPIDSTTEAPEDESTTS 436
>AE014297-4040|AAF56648.1| 676|Drosophila melanogaster CG6296-PA
protein.
Length = 676
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +1
Query: 142 EESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
E STS TT PEEST T PEE + PEES++ T PE+ T+
Sbjct: 373 EVSTSTTTDKPEEST--TEEPEEDSTTNGKPEESSTTTEQPEDSTT 416
Score = 32.3 bits (70), Expect = 0.14
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 130 TIIPEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
T P ++ TT PEE T T P E + T PE+ST T +PEE T+
Sbjct: 528 TTSPSDADDSTTEEPEEDTTTTKKPVEPSTTTEEPEDST--TEVPEESTT 575
Score = 31.1 bits (67), Expect = 0.33
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 112 VESMLRTIIPEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
V + T PEEST T PEE + PEES+ T PE+ST+ T P + T+
Sbjct: 374 VSTSTTTDKPEEST---TEEPEEDSTTNGKPEESSTTTEQPEDSTTTTEEPIDSTT 426
Score = 27.9 bits (59), Expect = 3.1
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 139 PEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
PEE ++ T PEES+ T PE+ST T P +ST+ E TS
Sbjct: 391 PEEDST-TNGKPEESSTTTEQPEDSTTTTEEPIDSTTEAPEDESTTS 436
>AY075095-1|AAL79357.1| 815|Drosophila melanogaster pygopus
protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 87 LPGVQDNPGGVYVADDNPGGVHIVDNNNPGGV--YVVDDNPGG 209
+PG PGG+ PGG+ NNPGG ++ NPGG
Sbjct: 366 IPGPGPGPGGLV----GPGGISPAHGNNPGGSGNNMLGGNPGG 404
>AY058500-1|AAL13729.1| 815|Drosophila melanogaster LD18280p
protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 87 LPGVQDNPGGVYVADDNPGGVHIVDNNNPGGV--YVVDDNPGG 209
+PG PGG+ PGG+ NNPGG ++ NPGG
Sbjct: 366 IPGPGPGPGGLV----GPGGISPAHGNNPGGSGNNMLGGNPGG 404
>AF457206-1|AAL91369.1| 815|Drosophila melanogaster pygopus
protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 87 LPGVQDNPGGVYVADDNPGGVHIVDNNNPGGV--YVVDDNPGG 209
+PG PGG+ PGG+ NNPGG ++ NPGG
Sbjct: 366 IPGPGPGPGGLV----GPGGISPAHGNNPGGPGNNMLGGNPGG 404
>AE014297-4758|AAF57161.1| 815|Drosophila melanogaster CG11518-PA
protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.25
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 87 LPGVQDNPGGVYVADDNPGGVHIVDNNNPGGV--YVVDDNPGG 209
+PG PGG+ PGG+ NNPGG ++ NPGG
Sbjct: 366 IPGPGPGPGGLV----GPGGISPAHGNNPGGSGNNMLGGNPGG 404
>AY051489-1|AAK92913.1| 456|Drosophila melanogaster GH14572p
protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 90 PGVQDNPGGVYVADDNPGGVHIVDNNNPGGVYVVDDNPGGVYVVDDNPGGVHIVDDNPGG 269
P NPGG ++N GG NN GG N GG + GG + GG
Sbjct: 196 PRPGQNPGGFEQPNENAGGFQQSGQNN-GGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGG 254
>AE013599-2436|AAF57889.1| 456|Drosophila melanogaster CG11395-PA
protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 90 PGVQDNPGGVYVADDNPGGVHIVDNNNPGGVYVVDDNPGGVYVVDDNPGGVHIVDDNPGG 269
P NPGG ++N GG NN GG N GG + GG + GG
Sbjct: 196 PRPGQNPGGFEQPNENAGGFQQSGQNN-GGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGG 254
>AE014298-2857|AAF48964.1| 2037|Drosophila melanogaster CG14200-PA
protein.
Length = 2037
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 96 VQDNPGGVYVADDNPGGVHIVDNNNPGGVYVVDDNPGGVYVV 221
V D+ V A+ G +HI N PG ++V +D PG V +
Sbjct: 1894 VVDDSEFVNAANAGVGMLHIDTRNGPGLLHVGNDEPGSVVFI 1935
>AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH06048
protein.
Length = 377
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 108 PGGVYVADDNPGGVHIVDNN----NPGGVYVVDDNPGGVYVVDDNPGGVHIVDDNPGG 269
PGG++ +PGG + + +PGG +PGG +PGG +PGG
Sbjct: 158 PGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGGPSPGGPSPGG 215
>AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA
protein.
Length = 377
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +3
Query: 108 PGGVYVADDNPGGVHIVDNN----NPGGVYVVDDNPGGVYVVDDNPGGVHIVDDNPGG 269
PGG++ +PGG + + +PGG +PGG +PGG +PGG
Sbjct: 158 PGGLFPGGPSPGGPSPGEPSPGEPSPGGPSPGGPSPGGPSPGGPSPGGPSPGGPSPGG 215
>BT003467-1|AAO39470.1| 640|Drosophila melanogaster RE70810p
protein.
Length = 640
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 111 GGVYVADDNPGGVHIVDNNNPGGVYVVDDN 200
G +Y N GG +DN NPG + N
Sbjct: 16 GSLYSLQQNHGGARFLDNPNPGSMTASSGN 45
>AE014296-2127|AAF49930.2| 640|Drosophila melanogaster CG32105-PB
protein.
Length = 640
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 111 GGVYVADDNPGGVHIVDNNNPGGVYVVDDN 200
G +Y N GG +DN NPG + N
Sbjct: 16 GSLYSLQQNHGGARFLDNPNPGSMTASSGN 45
>AE014298-1830|AAN09644.1| 582|Drosophila melanogaster CG32644-PB
protein.
Length = 582
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 148 STSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIP 264
ST+ TT+ E ST T+ +T E ST+ TT+P
Sbjct: 473 STTTTTVTTEPSTTTTVSSTTTTKDPTTTESSTTTTTVP 511
>AE014296-59|ABC66118.1| 423|Drosophila melanogaster CG34018-PA
protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 108 PGGVYVADDNPGGVHIVDNNN-PGGVYVVDDNPGGVYVVD 224
PG V D P V + NN+ PG V+ NP +V+
Sbjct: 352 PGSVPAQDSGPSSVWVASNNHQPGVTGVLQPNPSQGKIVN 391
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +1
Query: 139 PEESTSWTTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
P S TTI EEST P ST T E + TT+P +FT+
Sbjct: 7225 PSPSEVRTTIRIEEST----FPSRSTDRTTPSESPETPTTLPSDFTT 7267
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 4947 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 4982
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 5151 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 5186
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 6343 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 6378
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 6722 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 6757
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7028 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 7063
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7130 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 7165
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7334 TTIRVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 7369
Score = 27.1 bits (57), Expect = 5.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E TT+P +FT+
Sbjct: 7858 TTIRVEEST----LPSRSTDRTFPSESPEKPTTLPSDFTT 7893
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFT 276
TTI EEST +P S T + E + TT+P +FT
Sbjct: 4539 TTIRVEEST----LPSRSADRTTLSESPETPTTLPSDFT 4573
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 5354 TTIRVEEST----LPSRSTDRTSPSESPETPTTLPSDFTT 5389
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7538 TTIGVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 7573
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7640 TTIGVEEST----LPSRSTDRTTPSESPETPTTLPSDFTT 7675
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 5760 TTIGVEEST----LPSRSTDRTSPSESPETPTTLPSDFTT 5795
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 160 TTIIPEEST*LTIIPEEST*LTIIPEESTSLTTIPEEFTS 279
TTI EEST +P ST T E + TT+P +FT+
Sbjct: 7436 TTIRVEEST----LPSRSTDRTPPSESPETPTTLPSDFTT 7471
>AY095073-1|AAM11401.1| 184|Drosophila melanogaster RE21703p
protein.
Length = 184
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 79 QMVYREFKIILVESMLRTIIPEESTSWTTIIPEEST 186
Q+ Y VE+ + TI PE + T++IP EST
Sbjct: 123 QLFYSTTTESFVETPIPTIHPEPPATTTSVIPIEST 158
>BT025233-1|ABF17924.1| 818|Drosophila melanogaster FI01002p
protein.
Length = 818
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 164 VVHDVDSSGIIVRNIDSTRIILNS-R*TI*SQPSFFRHFRFFLNYTLSTDLCFAQ 3
+V D+S +++ N+ + ++ QPSF RHF + L +++C Q
Sbjct: 474 IVTGCDASDVLLLNLGNLEALVEKLTDNFTRQPSFVRHFYYANFLALKSNICRMQ 528
>AY118369-1|AAM48398.1| 707|Drosophila melanogaster RE11711p
protein.
Length = 707
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 164 VVHDVDSSGIIVRNIDSTRIILNS-R*TI*SQPSFFRHFRFFLNYTLSTDLCFAQ 3
+V D+S +++ N+ + ++ QPSF RHF + L +++C Q
Sbjct: 474 IVTGCDASDVLLLNLGNLEALVEKLTDNFTRQPSFVRHFYYANFLALKSNICRMQ 528
>AF289994-1|AAG02459.1| 818|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP95 protein.
Length = 818
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 164 VVHDVDSSGIIVRNIDSTRIILNS-R*TI*SQPSFFRHFRFFLNYTLSTDLCFAQ 3
+V D+S +++ N+ + ++ QPSF RHF + L +++C Q
Sbjct: 474 IVTGCDASDVLLLNLGNLEALVEKLTDNFTRQPSFVRHFYYANFLALKSNICRMQ 528
>AE014134-3332|AAX52674.1| 389|Drosophila melanogaster CG33509-PA
protein.
Length = 389
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 311 YDINRPFGIIYDVNSSGIVVNDVDSSGIIVNYVDSSGIIVNYVDSS 174
Y+ R FG++Y ++ +V D YVD S +I++Y+ ++
Sbjct: 320 YEEFRLFGVVYRAVAATVVKVPTDFITNDFKYVDRSKVILSYMKTN 365
>AE013599-3354|AAF46815.2| 818|Drosophila melanogaster CG5465-PA
protein.
Length = 818
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 164 VVHDVDSSGIIVRNIDSTRIILNS-R*TI*SQPSFFRHFRFFLNYTLSTDLCFAQ 3
+V D+S +++ N+ + ++ QPSF RHF + L +++C Q
Sbjct: 474 IVTGCDASDVLLLNLGNLEALVEKLTDNFTRQPSFVRHFYYANFLALKSNICRMQ 528
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,574
Number of Sequences: 53049
Number of extensions: 300368
Number of successful extensions: 991
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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