Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14j16r
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    41   2e-05
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    28   0.086
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           28   0.086

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
 Frame = -1

Query: 759 GVAHADELGYIFSIK-RLSNKTSPEDQLMVDRMTTMWTNFAKFGDPTPETTELLPIKWDP 583
           GV H DE+ Y+F      S K S +++ +  RM   ++ FA  G PT E +E     W  
Sbjct: 493 GVLHGDEVEYVFGHPLNKSLKYSDKERDLSLRMILYFSEFAYLGKPTKEDSE-----WPS 547

Query: 582 ITKDSYNYLKIDSVLT-LGNRPYKERMTLWDLF 487
            ++D   Y   D+  T LG  P       W+ F
Sbjct: 548 YSRDEPKYFIFDAEKTGLGKGPRTTYCAFWNEF 580


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -1

Query: 768 NAPGVAHADELGYIFSIKRLSNKTSPEDQLMVDRMTTMWTNFAKFGDPTPETTE 607
           N  GV HAD+   +     L++ T+  D  M   +   W +F   G P   + +
Sbjct: 458 NKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSVQ 511


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 0.086
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -1

Query: 768 NAPGVAHADELGYIFSIKRLSNKTSPEDQLMVDRMTTMWTNFAKFGDPTPETTE 607
           N  GV HAD+   +     L++ T+  D  M   +   W +F   G P   + +
Sbjct: 458 NKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVNSVQ 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,269
Number of Sequences: 438
Number of extensions: 4319
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)