Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14j13f
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    81   1e-17
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    30   0.022
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    29   0.029
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 80.6 bits (190), Expect = 1e-17
 Identities = 47/166 (28%), Positives = 82/166 (49%)
 Frame = +2

Query: 146 FKDYGVNHFTPIPVLGNAGPITVRLRHVAEDFDMVYKAFPEDRFTGRFDLLRPTVIIKDL 325
           +K  GV    P+P  G    + +  +  A     +Y+ +  +   G +    P +++ D 
Sbjct: 29  WKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDP 88

Query: 326 DLIKQITIKDFEHFLDHRALVDDTADPFFGRNLFSLRGQEWKDMRSTLSPAFTSSKMRGM 505
           +LIK I I+DF  F +    V +  +P    +L +L  + W+ +RS LSP FTS K++ M
Sbjct: 89  ELIKDILIRDFSKFANRGLGVFERTEP-LSPHLLNLEVERWRPLRSRLSPIFTSGKLKEM 147

Query: 506 VPFMVEVNNQMIDMIKKKIVANADGYLDCEGKDLTTRYANDVIASC 643
              ++E +  +   + K I  N    ++C  ++LT R+  DVI SC
Sbjct: 148 FYLIIECSLNLETYLDKLIEKNEP--IEC--RELTARFTTDVIGSC 189


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 29.9 bits (64), Expect = 0.022
 Identities = 14/75 (18%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +2

Query: 350 KDFEHFLDHRALVDDTAD-----PFFGRNLFSLRGQEWKDMRSTLSPAFTSSKMRGMVPF 514
           +D E  L     +D + +     P+ G  L    GQ+W++ R  ++P F  + ++  +  
Sbjct: 97  RDVEIILSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDL 156

Query: 515 MVEVNNQMIDMIKKK 559
                  +++ ++K+
Sbjct: 157 FNANARSVVEKMRKE 171


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 29.5 bits (63), Expect = 0.029
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 401 DPFFGRNLFSLRGQEWKDMRSTLSPAFT-SSKMRGMVPFMVEVNNQMIDMIKKKIV 565
           D +    L + +GQ W D+R  L+   T +S + G  P +  V +  I++I+++ V
Sbjct: 141 DRYTNLGLVNEQGQTWHDLRVALTSELTAASTVLGFFPALNIVADSFIELIRRQRV 196


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 199 WSNNSATSARG*GLRYGV*SFSRGQVHRQI*LAAA 303
           WS  S   + G    YG+  F+R    R + +AAA
Sbjct: 138 WSYVSTVYSEGSYGEYGIEVFTREATERNVCIAAA 172


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 199 WSNNSATSARG*GLRYGV*SFSRGQVHRQI*LAAA 303
           WS  S   + G    YG+  F+R    R + +AAA
Sbjct: 228 WSYVSTVYSEGSYGEYGIEVFTREATERNVCIAAA 262


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 634 YDVISVASGQ---VFTFTVEVAIRISHNFFF 551
           Y  IS  SG    V+++    + RI+HNFF+
Sbjct: 188 YAYISDLSGYALVVYSWAKNDSWRITHNFFY 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,991
Number of Sequences: 438
Number of extensions: 3726
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)