Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14j06f
         (621 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0522 - 25161595-25162285,25162394-25163139                       30   1.3  
01_01_0320 - 2578911-2579144,2579243-2579455,2579580-2579858,257...    29   2.3  
03_05_0525 + 25200207-25200580,25201061-25201751                       29   3.0  
03_05_0625 - 26225201-26225879,26226706-26227553                       29   3.9  
10_06_0155 + 11306808-11306956,11307157-11307418,11307496-113076...    28   5.2  
11_01_0795 + 6994597-6994774,6994812-6995092,6997289-6997335,699...    28   6.9  
09_06_0205 - 21567467-21567655,21567791-21567876,21567965-215680...    28   6.9  
03_05_0530 - 25306788-25306919,25307446-25308037,25308152-253089...    27   9.1  

>03_05_0522 - 25161595-25162285,25162394-25163139
          Length = 478

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 284 WVVCRSCALLFWCYSHKNPTDPLLIQQN-PRRTRGP 180
           WV+  SC    W   H+N   PLL++ N  ++  GP
Sbjct: 296 WVLDESCGQFKWVLEHQNNLKPLLLRLNRSKQVYGP 331


>01_01_0320 -
           2578911-2579144,2579243-2579455,2579580-2579858,
           2579961-2580050,2580258-2580439,2581366-2582470
          Length = 700

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 178 VHQQRAHEKPLKLQHFIKRTMRSQLWMHVYIEKFMHEFQANVVQATR 38
           + QQRA E  +KL    KR     L   + +EK +HE Q   ++ TR
Sbjct: 442 IEQQRADEDVMKLVEDQKREKEDVLARMLQLEKELHEKQQLELEVTR 488


>03_05_0525 + 25200207-25200580,25201061-25201751
          Length = 354

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -2

Query: 284 WVVCRSCALLFWCYSHKNPTDPLLIQQN-PRRTRGP 180
           WV+  SC    W   H+N   PLL+  N  ++  GP
Sbjct: 172 WVLDESCGQFKWVLEHQNNLKPLLLGLNRSKQVYGP 207


>03_05_0625 - 26225201-26225879,26226706-26227553
          Length = 508

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 299 RSPRQWVVCRSCALLFWCYSHKNPTDPLLIQQNPRR 192
           RS + WV+  SC  + W   H+N  D +  +Q  RR
Sbjct: 325 RSLQVWVLNESCDEMEWVPKHENNLDSVFPRQTRRR 360


>10_06_0155 +
           11306808-11306956,11307157-11307418,11307496-11307697,
           11308118-11308353
          Length = 282

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +2

Query: 203 FVVSTKDQLDFYVNNTKTTEHMNGRQPTVLDYDSVNDNILFVDVYSNS 346
           F+   KD +DF   ++ + +H NG + ++ D +S N  I   D  SNS
Sbjct: 225 FLGGHKD-VDFPFTDSSSNDHSNGTEDSLRDEESENSKIETDDKDSNS 271


>11_01_0795 +
           6994597-6994774,6994812-6995092,6997289-6997335,
           6997550-6997772
          Length = 242

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 362 NGNCTWNYYTRLQIKYCHLRYRSPRQWVVCRSCAL 258
           +G  TW +   L   +   R R P+ WV C  C+L
Sbjct: 83  HGVGTWKWPVGLGFDWAVARGRGPKFWVCCGICSL 117


>09_06_0205 -
           21567467-21567655,21567791-21567876,21567965-21568037,
           21568267-21568326,21568887-21568935,21569328-21569431,
           21569587-21569640,21569719-21569763,21569817-21569879,
           21570415-21570615,21570620-21570797,21570900-21570993,
           21571075-21572478,21572560-21572604,21572710-21572788,
           21573424-21573589,21573679-21573771,21573872-21573929,
           21574063-21574120,21574210-21574367,21575130-21575177,
           21575269-21575320,21575404-21575529
          Length = 1160

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 230 DFYVNNTKTTEHMNGRQPTVLDYDSVNDNILFVDVYSNST 349
           DF    T    H++GR    +D+D +N++ L  ++    T
Sbjct: 463 DFVQKQTNIEAHISGRDGFYVDFDKLNEDCLLNEISKTIT 502


>03_05_0530 -
           25306788-25306919,25307446-25308037,25308152-25308975,
           25309533-25309592,25310115-25310180,25310318-25310461,
           25310616-25310756,25310898-25311056,25311818-25311884,
           25311986-25312158,25312237-25312333,25312410-25312528,
           25312867-25312951,25313120-25313321,25314456-25314633
          Length = 1012

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 284 WVVCRSCALLFWCYSHKNPTDPLLIQQN 201
           WV+  SC    W   H+N   PLL++ N
Sbjct: 820 WVLNESCGHFEWLPKHQNNLMPLLLRLN 847


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,825,457
Number of Sequences: 37544
Number of extensions: 389901
Number of successful extensions: 1183
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)