Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14j06f
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 42 5e-04
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 42 5e-04
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 36 0.023
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.50
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 2.0
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 3.5
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 3.5
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 3.5
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 28 4.7
Z66494-1|CAA91262.2| 320|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 6.2
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 28 6.2
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical... 27 8.2
AF077541-4|AAM19065.1| 625|Caenorhabditis elegans Alpha-catulin... 27 8.2
AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin... 27 8.2
AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin... 27 8.2
AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin... 27 8.2
AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 416 LAFDPAKRILFWSEPQVKSIYWTSVKPGSKSTNGNLL---FKMENEIPEALAVDSCRGYI 586
+AFDP K +++W + ++IY +++ G++S G L F +P A+AVD G +
Sbjct: 4220 IAFDPRKELMYWIDGSERTIYRSAIANGNQSHEGQKLDVDFAAMGVVPTAIAVDYTTGNL 4279
Query: 587 Y 589
+
Sbjct: 4280 F 4280
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +2
Query: 290 LDYDSVNDNILFVDVYSNSTYSYHLPTKQSTKLVNSNI-LTFDLAFDPAKRILFWSEPQV 466
L +DS+ D I + D+ S + +T + + +T +A D R L+W + +
Sbjct: 1517 LAWDSLTDRIYWSDIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSSL 1576
Query: 467 KSIYWTSVKPGSKSTNGNLLFKMENEIPEALAVDSCRGYIYWTN 598
+I +++ + T LL P +AVD +G ++WT+
Sbjct: 1577 NTIEVANLEDPKQRT---LLVHQNVSQPRGIAVDPRKGVMFWTD 1617
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 407 TFDLAFDPAKRILFWSEPQVKS---IYWTSVKPGSKSTNGNLLFKMEN-EIPEALAVDSC 574
T+ LA DP +LFWS+ K+ +Y ++ + + + E+ +P A+AVD
Sbjct: 2572 TYALAIDPCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFR 2631
Query: 575 RGYIYWTNTN 604
IYW + N
Sbjct: 2632 NQKIYWADVN 2641
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Frame = +2
Query: 290 LDYDSVNDNILFVD---VYSNSTYSYHLPTKQSTKLVNSNILTFDLAFDPAKRILFWSEP 460
L D +N N+ F++ +N S T + L +A DP R L+W++
Sbjct: 2208 LAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQ 2267
Query: 461 QVKSIYWTSVKPGSKSTNGNLLFKMENEIPEALAVDSCRGYIYWTNTNL 607
K S GS+ ++ P L VD IYW++ +
Sbjct: 2268 GQKPTIQRSFLDGSRR---EVIVSSGIAEPTDLVVDVASKMIYWSDAKM 2313
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +2
Query: 416 LAFDPAKRILFWSEPQVKSIYWTSVKPGSKSTNGNLL---FKMENEIPEALAVDSCRGYI 586
+AFDP K +++W + ++IY +++ G++S G L F +P A+AVD G +
Sbjct: 4220 IAFDPRKELMYWIDGSERTIYRSAIANGNQSHEGQKLDVDFAAMGVVPTAIAVDYTTGNL 4279
Query: 587 Y 589
+
Sbjct: 4280 F 4280
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +2
Query: 290 LDYDSVNDNILFVDVYSNSTYSYHLPTKQSTKLVNSNI-LTFDLAFDPAKRILFWSEPQV 466
L +DS+ D I + D+ S + +T + + +T +A D R L+W + +
Sbjct: 1517 LAWDSLTDRIYWSDIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWVDSSL 1576
Query: 467 KSIYWTSVKPGSKSTNGNLLFKMENEIPEALAVDSCRGYIYWTN 598
+I +++ + T LL P +AVD +G ++WT+
Sbjct: 1577 NTIEVANLEDPKQRT---LLVHQNVSQPRGIAVDPRKGVMFWTD 1617
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 407 TFDLAFDPAKRILFWSEPQVKS---IYWTSVKPGSKSTNGNLLFKMEN-EIPEALAVDSC 574
T+ LA DP +LFWS+ K+ +Y ++ + + + E+ +P A+AVD
Sbjct: 2572 TYALAIDPCSGLLFWSDSGYKTSGGLYEPRIERSNLAGGSRKVIVSESISLPAAIAVDFR 2631
Query: 575 RGYIYWTNTN 604
IYW + N
Sbjct: 2632 NQKIYWADVN 2641
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Frame = +2
Query: 290 LDYDSVNDNILFVD---VYSNSTYSYHLPTKQSTKLVNSNILTFDLAFDPAKRILFWSEP 460
L D +N N+ F++ +N S T + L +A DP R L+W++
Sbjct: 2208 LAIDWINYNMYFINHDAERTNIEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQ 2267
Query: 461 QVKSIYWTSVKPGSKSTNGNLLFKMENEIPEALAVDSCRGYIYWTNTNL 607
K S GS+ ++ P L VD IYW++ +
Sbjct: 2268 GQKPTIQRSFLDGSRR---EVIVSSGIAEPTDLVVDVASKMIYWSDAKM 2313
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 371 KQSTKLVNSNILTFD-LAFDPAKRILFWSEPQVKSIYWTSVKPGSKSTNGNLLFKMENEI 547
K L I T D LA D +LFW++ + I +K G + +L+ + E
Sbjct: 558 KHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQ----RVLYSSDLEE 613
Query: 548 PEALAVDSCRGYIYWTN 598
P A+AVD G I+WT+
Sbjct: 614 PRAIAVDPEVGLIFWTD 630
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 35.9 bits (79), Expect = 0.023
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 371 KQSTKLVNSNILTFD-LAFDPAKRILFWSEPQVKSIYWTSVKPGSKSTNGNLLFKMENEI 547
K L I T D LA D +LFW++ + I +K G + +L+ + E
Sbjct: 560 KHEIVLTGDKIHTPDGLAVDWVHDLLFWTDGGLDQINVLDMKNGKQ----RVLYSSDLEE 615
Query: 548 PEALAVDSCRGYIYWTN 598
P A+AVD G I+WT+
Sbjct: 616 PRAIAVDPEVGLIFWTD 632
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 31.5 bits (68), Expect = 0.50
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +2
Query: 308 NDNILFVDVYSNSTYSYHLPTKQSTKLVNSNILTFDLAFDPAKRILFWS 454
N +LF D +N + T T +VNS LA DP KR++FW+
Sbjct: 1396 NRGVLF-DRQANIYVAKAKDTSTRTLIVNSTGTINSLAVDPIKRLIFWT 1443
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 281 VVCRSCALLFWCYSHKNPTDPLLIQQNPRRTRGPRSPAARPRKTIETST 135
VVC L F+C+ ++ P ++++ P R P P P + I+ T
Sbjct: 371 VVCALAVLFFFCWRNRKKEKPKVVRKAP--LRAPIRPRQPPNQNIKPIT 417
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 161 GALLVNAARAFSWDFVVSTKDQLDFYVNNTKTTEHMNGRQPTVLDYDSVNDNILFVDVYS 340
G LLV+ +W DQ+ + + N E + T +D N+ F+ +
Sbjct: 361 GTLLVHPLEELTWQLEGLQPDQMPYLIVNLSFEEEIKNGNSTTIDIS--NETTQFLMITG 418
Query: 341 NSTY 352
N T+
Sbjct: 419 NQTF 422
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 239 HKNPTDPLLIQQNP---RRTRGPRSPAARPRKTIETSTFY*TNDAFSALDAR 93
H++P D +I +P RR+ PR P AR ++ +S + N+ + + AR
Sbjct: 730 HQSPADSCIITASPSAPRRSHSPRGPTARIPLSLASSPVH-VNNNWGSYSAR 780
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 239 HKNPTDPLLIQQNP---RRTRGPRSPAARPRKTIETSTFY*TNDAFSALDAR 93
H++P D +I +P RR+ PR P AR ++ +S + N+ + + AR
Sbjct: 864 HQSPADSCIITASPSAPRRSHSPRGPTARIPLSLASSPVH-VNNNWGSYSAR 914
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 239 HKNPTDPLLIQQNP---RRTRGPRSPAARPRKTIETSTFY*TNDAFSALDAR 93
H++P D +I +P RR+ PR P AR ++ +S + N+ + + AR
Sbjct: 730 HQSPADSCIITASPSAPRRSHSPRGPTARIPLSLASSPVH-VNNNWGSYSAR 780
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 239 HKNPTDPLLIQQNP---RRTRGPRSPAARPRKTIETSTFY*TNDAFSALDAR 93
H++P D +I +P RR+ PR P AR ++ +S + N+ + + AR
Sbjct: 864 HQSPADSCIITASPSAPRRSHSPRGPTARIPLSLASSPVH-VNNNWGSYSAR 914
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 239 HKNPTDPLLIQQNP---RRTRGPRSPAARPRKTIETSTFY*TNDAFSALDAR 93
H++P D +I +P RR+ PR P AR ++ +S + N+ + + AR
Sbjct: 444 HQSPADSCIITASPSAPRRSHSPRGPTARIPLSLASSPVH-VNNNWGSYSAR 494
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 257 TEHMNGRQPTVLDYDSVNDNILFVDVYSNSTYSYH 361
TEH +GR + +ND+ DVYS+ +YSYH
Sbjct: 232 TEH-DGRSVSSRSGSRLNDSPGSRDVYSSHSYSYH 265
>Z66494-1|CAA91262.2| 320|Caenorhabditis elegans Hypothetical
protein C34C6.1 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 338 SNSTYSYHLPTKQSTKLVNSNILTFDLAFDPAKRILFWSEPQVKSI 475
S + Y++ S L + L FD+ + ILFWS Q++ +
Sbjct: 252 SQALYAFCTSCMSSDLLFTAQFLAFDMFTVGSAVILFWSNSQIRGL 297
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -2
Query: 206 QNPRRTRGPRSPAARPRKTIE---TSTFY*TNDAF 111
+ PRR RGPR+P P + E +S+ +ND+F
Sbjct: 14 EEPRRPRGPRTPDGEPTEANERPCSSSSSLSNDSF 48
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 350 TWNYYTRLQIKYCHLRYRSPRQWVVCRSCALLFWCYSHKNPTDPLLI 210
T+++ + Q C R+ R +V S +WC HK P + +I
Sbjct: 504 TFSFESFYQFALCGYSSRTTRSFVQNASTKKKWWCQPHKPPQEDQMI 550
>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
F31C3.3 protein.
Length = 2029
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 41 RCLHDIGLKLVHKFFNINVHPKLR--THRSFNKMLKFQWFFVG 163
R + +G V + F +N+ P + THR F+KM++F FF G
Sbjct: 1815 RDMPPVGGISVKEHFELNIAPMVAEITHRLFDKMMRF--FFPG 1855
>AL110485-31|CAB60352.2| 280|Caenorhabditis elegans Hypothetical
protein Y46G5A.7 protein.
Length = 280
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 427 PGEENFILERTPGEEYLLDIRQARLEEYKWKSSVQNGK 540
P E++ ILE T + D R R E Y++ ++ NGK
Sbjct: 221 PLEKSVILEGTNSRQRSEDTRLYRYENYEFLTTCNNGK 258
>AF077541-4|AAM19065.1| 625|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform c protein.
Length = 625
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 468 RVFTGHPSSPARRVQMEIFCSKW 536
R HPSS R +E+FC W
Sbjct: 480 RTLCVHPSSRIARENLEVFCDTW 502
>AF077541-3|AAM54172.1| 750|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform d protein.
Length = 750
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 468 RVFTGHPSSPARRVQMEIFCSKW 536
R HPSS R +E+FC W
Sbjct: 480 RTLCVHPSSRIARENLEVFCDTW 502
>AF077541-2|AAL77190.1| 759|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform b protein.
Length = 759
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 468 RVFTGHPSSPARRVQMEIFCSKW 536
R HPSS R +E+FC W
Sbjct: 480 RTLCVHPSSRIARENLEVFCDTW 502
>AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform a protein.
Length = 803
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 468 RVFTGHPSSPARRVQMEIFCSKW 536
R HPSS R +E+FC W
Sbjct: 480 RTLCVHPSSRIARENLEVFCDTW 502
>AF036704-4|ABA00184.1| 352|Caenorhabditis elegans Hypothetical
protein ZK185.5 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 193 ERAGRVHQQRAHEKPLKLQHFIKRTMRSQLWMHVYIEK-FMH 71
E VH PLK+ H I + + +L M V++E+ F+H
Sbjct: 302 EALAEVHIVMDENLPLKVTHDIAQKLEQKLMMLVFVERCFVH 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,877
Number of Sequences: 27780
Number of extensions: 358807
Number of successful extensions: 1018
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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