Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14i20r
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    24   1.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     24   1.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   7.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   7.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.3  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   7.3  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   7.3  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   9.6  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 4   FKNIKQG*VVECGECWQACLPGPMHAAYAMRCGM*LCS*RPEKRAW*GPQ 153
           + +I+QG    C  C  +C       A +  CG+  C+  P++    GPQ
Sbjct: 25  YPSIRQGTTSYCLGCGDSCHKCKYGIAMSSACGIVQCAKGPDELCG-GPQ 73


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 208 PQCRWTRRLTAETTWRYS 155
           P+C+W+R+    T W  S
Sbjct: 153 PECKWSRKGFLRTRWSIS 170


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -3

Query: 772 LRRTVAASRTNTCGTD-NS*WRSPKSCQSTCWDYSNRVTYN 653
           ++ +V+   T T  T  N+  R+P  C  T   YSN  T++
Sbjct: 339 IKISVSYPSTETLNTKCNTLERTPSKCSQTSVHYSNGQTHS 379


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 429 INRSDGGPRSRHVHQRVHTARRGHPRPLGRA 337
           +++S  G +S+  HQ++H  +  HP+   +A
Sbjct: 798 LSKSVNGDQSQPPHQQLHHHQSTHPQAQAQA 828


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 413 PSLRLMNPAPRAAPVLSPPP 472
           P+L L  P  +   V+SPPP
Sbjct: 887 PALALAEPYNQRGTVVSPPP 906


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 413 PSLRLMNPAPRAAPVLSPPP 472
           P+L L  P  +   V+SPPP
Sbjct: 925 PALALAEPYNQRGTVVSPPP 944


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 653 YHMEANHTMEPTL 615
           +H   NHTM PT+
Sbjct: 335 HHQHGNHTMGPTM 347


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 396 HVHQRVHTARRGH 358
           H H R+HT  R H
Sbjct: 164 HRHMRIHTGERPH 176


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 239 DYRGSEYVY 213
           DYRG EY+Y
Sbjct: 253 DYRGEEYLY 261


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 239 DYRGSEYVY 213
           DYRG EY+Y
Sbjct: 253 DYRGEEYLY 261


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 205 QCRWTRRLTAETTWRYSPGGLTTPSSLAS 119
           QCR   RLT ET    + G L     + S
Sbjct: 180 QCRTKHRLTGETRLSATKGRLVITEPVGS 208


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 EYVYPAAVPLDSETHGGDDVA 162
           EY+ P  +P   E H  +D+A
Sbjct: 31  EYLMPDIMPCADELHISEDIA 51


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 224 EYVYPAAVPLDSETHGGDDVA 162
           EY+ P  +P   E H  +D+A
Sbjct: 31  EYLMPDIMPCADELHISEDIA 51


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 626 EPTLAELTEVAIKSLSRNKEGFF 558
           +P   ELTE ++ S+     GFF
Sbjct: 288 KPDYRELTEYSVTSVRLISSGFF 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,235
Number of Sequences: 438
Number of extensions: 5460
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)