Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14i20f
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 33 0.22
06_03_1359 + 29554078-29554375,29554470-29554655,29554768-295549... 33 0.22
01_05_0711 - 24495399-24495595,24495733-24495826,24495906-244959... 31 0.51
05_07_0195 - 28331445-28331641,28331841-28331934,28332019-283320... 31 0.89
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152... 30 1.2
09_04_0629 - 19098087-19098516,19099120-19099370 30 1.5
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 2.7
02_05_0686 - 30900748-30902167,30903442-30904742 29 2.7
02_03_0005 + 13865016-13865025,13865247-13865374,13865467-138659... 29 2.7
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 29 3.6
08_01_0051 - 355392-355450,355507-355634,356271-356425,356883-35... 28 4.7
06_01_0576 - 4073261-4073821,4073891-4074145 28 4.7
05_05_0057 + 21995018-21997006 28 4.7
01_06_1192 - 35302863-35303984,35305596-35306024 28 4.7
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 4.7
01_05_0627 + 23802235-23802853,23803357-23803430,23804207-238043... 28 4.7
01_01_0120 + 1119319-1119447,1120565-1120632,1121682-1121928,112... 28 4.7
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 28 6.2
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 28 6.2
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 28 6.2
06_02_0216 + 13157377-13157583,13159271-13159339,13160727-131608... 28 6.2
05_07_0177 + 28171863-28171980,28173003-28173082,28173173-281732... 28 6.2
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 28 6.2
05_07_0226 - 28515052-28515064,28515426-28515502,28515610-285157... 27 8.2
04_04_0824 - 28399144-28399385,28400193-28400312,28400422-284004... 27 8.2
04_01_0472 - 6144655-6145182,6145204-6145881,6149337-6149765,614... 27 8.2
03_02_1022 + 13260647-13260834,13260965-13261070,13262052-132621... 27 8.2
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 27 8.2
02_04_0055 - 19290975-19292312 27 8.2
01_06_0105 + 26507988-26508105,26509398-26509477,26509673-265097... 27 8.2
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 32.7 bits (71), Expect = 0.22
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMPSPR----NMTTFRAYPLLPSYQA 230
SPT S + + SP P PSS + + S A SPR + T+ P P+Y
Sbjct: 1726 SPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP 1785
Query: 229 RSPSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSRW*PSLS-NPYRRPQEPAASSER 59
SPS S YS +S G + PTS + PS S +P P+++ ++
Sbjct: 1786 TSPSYSQPS-PSYSPTSPYTTSGGPSPD-YSPTSPNYSPSGSYSPTAPGYSPSSTGQQ 1841
>06_03_1359 +
29554078-29554375,29554470-29554655,29554768-29554923,
29555557-29555694,29555789-29555909,29556339-29556345
Length = 301
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = -1
Query: 229 RSPSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSRW*PSLSNPYRRPQEPAASSERSVN 50
+SP SL++ + S SS V +++DP P+ NP+ E A+ + V
Sbjct: 144 KSPMSLFSRHSRRSSSSEDGSVRSGSSKKVDPKC----PNAGNPFHECTEHCAAKMKEVG 199
Query: 49 KRTMSAESNTQHRHNG 2
++ + + ++ + G
Sbjct: 200 QQNKTVKKSSSRKKGG 215
>01_05_0711 -
24495399-24495595,24495733-24495826,24495906-24495986,
24496130-24496178,24496281-24496366,24496452-24496679,
24496797-24496835,24496911-24497000,24497093-24497155,
24497233-24497302,24497400-24497446,24497544-24497606,
24497702-24497752,24497851-24497934,24498075-24498139,
24498243-24498299,24498409-24498526,24498624-24498674,
24499100-24499186,24499272-24499351,24500663-24500780
Length = 605
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 504 VPTHRWCPG*PLHRTGRRRPSKPSPL 427
+P HR+ G H + RPSKPSPL
Sbjct: 513 IPNHRYFVGAQFHPEFKSRPSKPSPL 538
>05_07_0195 -
28331445-28331641,28331841-28331934,28332019-28332099,
28332186-28332234,28332334-28332419,28332513-28332740,
28332819-28332857,28332958-28333047,28333207-28333269,
28333371-28333449,28333539-28333585,28333668-28333730,
28333814-28333864,28333977-28334060,28334162-28334226,
28334559-28334676,28334775-28334825,28335228-28335314,
28335633-28335712,28336676-28336793
Length = 589
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 504 VPTHRWCPG*PLHRTGRRRPSKPSPL 427
+PTHR+ G H + RP KPSPL
Sbjct: 497 LPTHRFFVGAQFHPEFKSRPGKPSPL 522
>11_06_0645 -
25814302-25814759,25814853-25815005,25815032-25815214,
25815342-25815531,25815624-25815784,25816136-25816623,
25817035-25817075
Length = 557
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 204 RATSTPTPARGPALRASAG-SASTPRHPGGNR 112
R+ STP P RG A + G S S+PR GG R
Sbjct: 495 RSLSTPPPVRGAASMRNRGISFSSPRGTGGRR 526
>09_04_0629 - 19098087-19098516,19099120-19099370
Length = 226
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
PA SGR TS T + A+R A PR GG
Sbjct: 62 PASSGRSPTSPSTSSSSTAMRFRKAEAELPRATGG 96
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMPSPR--NMTTFRAYPLLPSYQARS 224
SPT S + SP P PSSV+ S A SP + T+ P PSY S
Sbjct: 1788 SPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPSSPNYYSSTSPTYSPTSPSYSQPS 1847
Query: 223 PSSLWASR 200
PS SR
Sbjct: 1848 PSYSPTSR 1855
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 195 STPTPARGPALRASAGSASTPRHPGGNRP 109
S+P+PA PA R ++ S S P PG P
Sbjct: 269 SSPSPAPAPAARPASPSPSLPLPPGRESP 297
>02_03_0005 +
13865016-13865025,13865247-13865374,13865467-13865994,
13866111-13866287
Length = 280
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 126 DDVGSRRSLQTPSTPAPELESEYWSRDAQSELGER 230
DDV + L+TP + AP L+SE ++D+ S+L ++
Sbjct: 198 DDVATDLELKTPGSSAP-LQSEIANKDSSSDLKKK 231
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = -1
Query: 547 CAASVAAVQWCRATCPDTPMVPR--LAFAPHR*AEAEQAESATWASRQ*VLESPTVGKCS 374
C++++ T P + L+ +P A+ +S SR+ VL+S S
Sbjct: 719 CSSAITRKGTKEVTMPTNAFLSNQILSTSPRGTVVADSYQSNLQNSRKVVLDSAPNSVMS 778
Query: 373 KDNRDSSPVCPRRWPSSVRAAVSVATDM 290
+R +CP + PSS AV TD+
Sbjct: 779 SPSRSPRILCPDQIPSSAFWAVKPHTDV 806
>08_01_0051 -
355392-355450,355507-355634,356271-356425,356883-357012,
357600-357739,358384-358552,360286-360557
Length = 350
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = -1
Query: 322 VRAAVSVATDMPSPRNMTTFRAYPLLPSYQARSPSSLWASRDQYSDSSSGAGVEGVCRER 143
+R A S R+ + YP P R P + W + + + GVE ++
Sbjct: 28 IRTARPTPNATRSRRDQGNAQPYPPPPP---RGPGTTWVPQVSGTKYQAARGVEEATAKQ 84
Query: 142 LDPTSSRW*PSLSNPYRRPQEPAASSERSVNKRTMSAESN 23
L P R PS++ P P ++ +V ++ E +
Sbjct: 85 LRPRPDRT-PSIAIPVDSDASPRKNTPETVTSPLVNGEKS 123
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -2
Query: 201 ATSTPTPARGPALRASAGSASTPRHPGGNRP 109
++S+P+PA PA +S+ +ASTPR P P
Sbjct: 6 SSSSPSPALAPA--SSSSTASTPRAPRQQLP 34
>05_05_0057 + 21995018-21997006
Length = 662
Score = 28.3 bits (60), Expect = 4.7
Identities = 24/77 (31%), Positives = 31/77 (40%)
Frame = -1
Query: 244 PSYQARSPSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSRW*PSLSNPYRRPQEPAASS 65
P A +P +RD Y SSS R L+ TSS PS +P PAA++
Sbjct: 405 PDPDADTPGGSVQTRDYYDTSSSSRR-----RRSLERTSSVRRPSFEVTDAKPVLPAAAA 459
Query: 64 ERSVNKRTMSAESNTQH 14
SV + S H
Sbjct: 460 ITSVKDSPLIGSSEFYH 476
>01_06_1192 - 35302863-35303984,35305596-35306024
Length = 516
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 384 PTVGLSKTYCLDAQVADSACSASAYLCGAKANLG 485
PT ++ C D+ + D +C+A+ Y+ A A+ G
Sbjct: 360 PTANVTMRQCADSCLRDCSCAAALYVLAAVADHG 393
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGGNRPYLIHI---DGXXXXXXXXRGVS 52
P G TPTP+ P +S S +TP GG P G S
Sbjct: 244 PTTPGGGGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPSDTPPSPSSGSSRTTPGGCS 303
Query: 51 TNAPCRLSPTLSTDTT 4
T PC P S+ T+
Sbjct: 304 TPTPCGTPPAPSSGTS 319
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGGNRP 109
P+ G +S+PTP P +S S +TP GG P
Sbjct: 140 PSTPGGGCSSSPTPCDAPPSPSSDTSPTTPGGGGGYSP 177
>01_05_0627 +
23802235-23802853,23803357-23803430,23804207-23804364,
23804640-23804964
Length = 391
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = -1
Query: 583 ASRAQEAMEASWCAASVAAVQWCRATCPDTPMV-PRLAFAPHR*AEAEQAESATWASRQ* 407
++R + A W S A + P P PRL+++ E E+A +A S
Sbjct: 66 STRTSSSRPAPWWRRSRMAAAVAVTSSPPRPSTSPRLSWSSWEADELEEAATAPRPSTSR 125
Query: 406 VLESPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMPSP 281
+ + ++ + P R P SVRA V P P
Sbjct: 126 RRRPASPRAAIATSVEAVVLAPGRRPRSVRAEVVAIAPRPPP 167
>01_01_0120 +
1119319-1119447,1120565-1120632,1121682-1121928,
1122430-1122498,1122782-1122907,1123326-1123406,
1123484-1123561,1124084-1124319,1124399-1124545,
1124864-1125152,1125231-1125352,1125713-1125749
Length = 542
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGGNRP 109
P S A + P P PA +A +AS P P G P
Sbjct: 3 PRESSTVAAAAPFPQLDPAGGEAAAAASPPPDPAGGEP 40
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 75 AGSCGRRYGLDKDGYHRDDVGSRRSLQTPSTPAPELESEYWSRDAQSEL 221
AG +G+DK+G D+ ++ A + E E W D++ EL
Sbjct: 69 AGEHASIFGIDKNGDDSDEPCAKDDANQSDMAALKEEEENWELDSEPEL 117
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -2
Query: 225 PPAHSGRRATSTPTPARGPALRASAGSASTPR-HPGGNRPYLIHIDG 88
PP S T P + P A + P HPG RP + ++G
Sbjct: 584 PPRPSSGDFTFRPLVSASPTPELGASGSQVPLFHPGNQRPPMARVEG 630
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 228 APPAHSGRRATSTPTPARGPALRASAGSASTPRHPGGNRPY 106
A A + A P A P++ A A + S+P P G PY
Sbjct: 202 ADAAAPEKPAAKAPPAAPAPSMPAPAPTLSSPERPHGGFPY 242
>06_02_0216 +
13157377-13157583,13159271-13159339,13160727-13160851,
13160959-13161190
Length = 210
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 235 QARSPSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSR 122
QARS + WA + +DS G G EG+C + LD + R
Sbjct: 176 QARSRA--WAG-EGVADSRVGVGKEGLCADHLDRSIGR 210
>05_07_0177 +
28171863-28171980,28173003-28173082,28173173-28173259,
28173796-28173913,28174070-28174126,28174217-28174281,
28174390-28174473,28174599-28174649,28174734-28174796,
28174889-28174935,28175024-28175093,28175363-28175425,
28175523-28175612,28175700-28175738,28175820-28176047,
28176348-28176433,28176515-28176563,28176972-28177052,
28177143-28177236,28177396-28177598
Length = 590
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 504 VPTHRWCPG*PLHRTGRRRPSKPSPL 427
+P HR+ G H + RPSKPS L
Sbjct: 496 IPNHRFFVGVQFHPEFKSRPSKPSAL 521
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -2
Query: 228 APPAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
AP H GRR+ P PA P+ G A + G
Sbjct: 70 APAPHPGRRSPPAPAPANPPSSDPMPGGAPSAAPAAG 106
>05_07_0226 -
28515052-28515064,28515426-28515502,28515610-28515767,
28515852-28515937,28516048-28516351,28516410-28517490
Length = 572
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -3
Query: 572 PGGDGGELVCS----VGGRSTVVSRHVSRHTDGAQVSLCTAQVGGGRASRVRYLG 420
PG GGE S VGG+ + T+ ++ T GGG A R G
Sbjct: 366 PGATGGERAASFNKAVGGQDELAKLEAGAKTEQQTTAVTTTTKGGGAAGAERARG 420
>04_04_0824 -
28399144-28399385,28400193-28400312,28400422-28400453,
28400531-28400625,28400713-28400786,28400883-28401018,
28401096-28401333,28401508-28401555,28401593-28401780,
28401862-28401983,28402061-28402226,28402321-28402443,
28403068-28403139,28403244-28403351,28404212-28404328,
28404458-28404596,28404702-28404808,28404904-28405013,
28405141-28405274,28405348-28405497,28405571-28405791,
28405868-28406677,28410261-28410473
Length = 1254
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 225 PPAHSGRRATSTPTPARGPA-LRASAGSASTPRHPGGNRP 109
PP + GR + P GP + GS S HPGG P
Sbjct: 159 PPEYQGRGGPGSHHPGGGPPDYQGRGGSGS--HHPGGGPP 196
>04_01_0472 -
6144655-6145182,6145204-6145881,6149337-6149765,
6149930-6150123,6150222-6150261
Length = 622
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = -1
Query: 445 EQAESATWASRQ*VLESPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMPSPRNMTT 266
E+A + SR+ V+ SP V + DS P W S+ + ++ R +
Sbjct: 197 EEAANILEYSRKTVISSP-VALIRWEMADSDS--PATWELSLPQSEGYVIELH--RMLRR 251
Query: 265 FRAYPLLPSYQARSPSSLWASR 200
R YP PSY+ R S+W +R
Sbjct: 252 LR-YPGFPSYRVRQCGSVWEAR 272
>03_02_1022 +
13260647-13260834,13260965-13261070,13262052-13262169,
13262271-13262539
Length = 226
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +3
Query: 105 DKDGYHRDDVGSR--RSLQTPSTPAPELESEYWSRDAQSELGERAWYDGSSGYARNVVMF 278
D D DD+ ++ + T SE D +LG + S+GYA V
Sbjct: 125 DGDEMETDDLPEPEVKTYEDGGTKITVTTSEITPEDDDEDLGPKRITPASTGYANKSVSK 184
Query: 279 LGDGMSVATLTAARTLLGQRRGQTGEESR 365
+ V + RT + + + G++ R
Sbjct: 185 KSASLGVKKKPSKRTFRNKSKSKKGDQKR 213
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 27 DSADMVRXXXXXXXXAAGSCGRRYGLDKDGYHRDDVGSRRSLQT 158
D D + A GS R YG D+D Y D+ S R Q+
Sbjct: 235 DREDEYKGSHSNHEYAEGSGRRSYGRDRDSYGDDEAYSSRGRQS 278
>02_04_0055 - 19290975-19292312
Length = 445
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 331 PSSVRAAVSVATDMPSPRNMTTFRAYPLLPSYQARSPSSLWASRDQYSDSSSGAGVE 161
P S R A +V + P P ++ + L+P + ++ SS +S S + +G G++
Sbjct: 86 PPSFRRAAAVVAEPPPPLRSSSGASRKLIPFGRRKASSSSSSSSSSASVALAGGGLK 142
>01_06_0105 +
26507988-26508105,26509398-26509477,26509673-26509759,
26510446-26510496,26510581-26510698,26510820-26510924,
26511015-26511079,26511554-26511637,26511741-26511791,
26511874-26511936,26512016-26512062,26512155-26512233,
26512365-26512427,26512761-26512850,26512932-26513168,
26513372-26513457,26513664-26513685,26513686-26513766,
26513859-26513952,26514388-26514566
Length = 599
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 504 VPTHRWCPG*PLHRTGRRRPSKPSPL 427
+P+H++ G H + RP KPSPL
Sbjct: 513 LPSHKFFIGVQFHPEFKSRPGKPSPL 538
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,476,650
Number of Sequences: 37544
Number of extensions: 391998
Number of successful extensions: 2203
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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