Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14i20f
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 36 0.021
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 36 0.021
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 31 0.79
AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 30 1.0
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 2.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 29 3.2
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 29 3.2
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 3.2
AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical ... 29 3.2
Z95559-21|CAM35842.1| 440|Caenorhabditis elegans Hypothetical p... 28 4.2
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 4.2
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 4.2
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 28 5.6
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 28 5.6
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 28 5.6
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 5.6
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 5.6
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 5.6
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 5.6
U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical pr... 27 7.4
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 27 7.4
Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical pr... 27 9.7
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 27 9.7
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 27 9.7
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 35.9 bits (79), Expect = 0.021
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMP-SPRNMTTFRAYPLLPSYQARSP 221
SPT S + SP P+ PSS S T P SPR ++ + P P+Y SP
Sbjct: 1731 SPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSP 1790
Query: 220 SSLWASRDQYSDSS----SGAGVEGVCRERLDPTSSRW*PSLSNPYRRPQEPAAS 68
S S QYS +S + + PTS + P S+P P P+ S
Sbjct: 1791 -SYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSP--SSPTYSPASPSYS 1842
Score = 32.7 bits (71), Expect = 0.20
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMP-SPRNMTTFRAY-PLLPSYQARS 224
SPT S + SP P PSS R + + T P SP T Y P P+Y S
Sbjct: 1648 SPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTS 1707
Query: 223 PSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSRW*PSLS--NPYRRPQEP 77
PS + S YS SS P+ S P S +P P P
Sbjct: 1708 PS--YESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSP 1756
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 35.9 bits (79), Expect = 0.021
Identities = 36/115 (31%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMP-SPRNMTTFRAYPLLPSYQARSP 221
SPT S + SP P+ PSS S T P SPR ++ + P P+Y SP
Sbjct: 1738 SPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSP 1797
Query: 220 SSLWASRDQYSDSS----SGAGVEGVCRERLDPTSSRW*PSLSNPYRRPQEPAAS 68
S S QYS +S + + PTS + P S+P P P+ S
Sbjct: 1798 -SYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTYSP--SSPTYSPASPSYS 1849
Score = 32.7 bits (71), Expect = 0.20
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMP-SPRNMTTFRAY-PLLPSYQARS 224
SPT S + SP P PSS R + + T P SP T Y P P+Y S
Sbjct: 1655 SPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTS 1714
Query: 223 PSSLWASRDQYSDSSSGAGVEGVCRERLDPTSSRW*PSLS--NPYRRPQEP 77
PS + S YS SS P+ S P S +P P P
Sbjct: 1715 PS--YESGGGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSP 1763
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 30.7 bits (66), Expect = 0.79
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
P G+R+ TP PA P + AG P GG
Sbjct: 190 PGQGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGG 224
>AC024790-5|AAF60640.2| 119|Caenorhabditis elegans Hypothetical
protein Y47D7A.2 protein.
Length = 119
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 289 PSPRNMTTFRAYPLLPSYQARSPSSLWASRDQYSDSSS 176
P+P+ YP PSY A S ++S D D+ S
Sbjct: 40 PTPKKYPVAPTYPSTPSYSAPPAQSAYSSSDNQEDTES 77
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -1
Query: 397 SPTVGKCSKDNRDSSPVCPRRWPS---SVRAAVSVATDMPSPRNMTTFRAYPLLP--SYQ 233
S + +K+N++ V R S +VR +V + +P PR + FRA P LP S +
Sbjct: 1393 SGSTSSATKENQEQLRVIFDREESHSPTVRLSVPLPPALPPPRGSSVFRAPPPLPPKSNR 1452
Query: 232 ARSPSSLWASRDQYSDSSS 176
S S +S + D S
Sbjct: 1453 HNSNSPTLSSEQPFEDPMS 1471
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
P G+R+ TP P+ P + AG P GG
Sbjct: 190 PGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGG 224
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 522 SGVAPRVPTHRWCPG*PLHRTGRRRPSKPSPLP 424
+G P P+H CP P+ + RR S +P+P
Sbjct: 809 NGFNPYNPSHSQCPPPPMDYSNNRRNSNLTPMP 841
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 522 SGVAPRVPTHRWCPG*PLHRTGRRRPSKPSPLP 424
+G P P+H CP P+ + RR S +P+P
Sbjct: 809 NGFNPYNPSHSQCPPPPMDYSNNRRNSNLTPMP 841
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
protein C05D12.3c protein.
Length = 1001
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 461 VRCK--G*PGHHRCVGTRGATPLYCGHRRCTPARLHRLLGSRR 583
V+C+ G P RCV G YCG R C P L S+R
Sbjct: 49 VKCQRWGIPDKDRCVCAPGWYDKYCGIRGCRPPNEGNLDNSKR 91
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
protein C05D12.3a protein.
Length = 1039
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 461 VRCK--G*PGHHRCVGTRGATPLYCGHRRCTPARLHRLLGSRR 583
V+C+ G P RCV G YCG R C P L S+R
Sbjct: 49 VKCQRWGIPDKDRCVCAPGWYDKYCGIRGCRPPNEGNLDNSKR 91
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 513 APRVPTHRWCPG*PLHRTGRRRPSKPSPLPGRLG-SRS*KVRQLENVRKTIGTP 355
+P VP P P H+T +R + PSP+P LG + Q + +R + TP
Sbjct: 1518 SPTVPKIITVPE-PAHQTDSQRVTAPSPVPRILGVTIPESAHQTQTLRSAVHTP 1570
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 201 ATSTPTPARGPALRASAGSASTPRHPG 121
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 201 ATSTPTPARGPALRASAGSASTPRHPG 121
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 382 KCSKDNRDSSPVCPRRWPSSVR-AAVSVATDMPSPRNMTTFRAYPLLPSYQARSPS---S 215
K S R SPV RR PSS+R + V P + + + P + RSPS
Sbjct: 407 KSSPKQRQDSPVRRRRSPSSIRKESQRVRKHSPEQKRNGRHDSRSVSPVRRRRSPSPDNR 466
Query: 214 LWASRDQYS 188
SR QYS
Sbjct: 467 QLGSRKQYS 475
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 28.7 bits (61), Expect = 3.2
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = -1
Query: 382 KCSKDNRDSSPVCPRRWPSSVR-AAVSVATDMPSPRNMTTFRAYPLLPSYQARSPS---S 215
K S R SPV RR PSS+R + V P + + + P + RSPS
Sbjct: 407 KSSPKQRQDSPVRRRRSPSSIRKESQRVRKHSPEQKRNGRHDSRSVSPVRRRRSPSPDNR 466
Query: 214 LWASRDQYS 188
SR QYS
Sbjct: 467 QLGSRKQYS 475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 201 ATSTPTPARGPALRASAGSASTPRHPG 121
+T+T TP GP + A+ + +TP PG
Sbjct: 2026 STTTTTPGTGPTVTAAQTTTTTPSTPG 2052
>AC024790-4|AAF60636.1| 121|Caenorhabditis elegans Hypothetical
protein Y47D7A.7 protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -1
Query: 289 PSPRNMTTFRAYPLLPSYQARSP--SSLWASRDQYSDSSS 176
P+P+ YP PSY A+ P S + S D D+ S
Sbjct: 40 PTPKKYPVAPTYPSTPSYSAQPPPAPSAYTSSDNQEDTES 79
>Z95559-21|CAM35842.1| 440|Caenorhabditis elegans Hypothetical
protein Y41E3.10b protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.2
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = -1
Query: 547 CAASVAAVQWCRATCPDTPMVPRL 476
C A+++ +++ R+ CPD P+ R+
Sbjct: 375 CLAAISEIEYLRSICPDPPLPNRI 398
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
P G+R+T TP A P AG P GG
Sbjct: 192 PGQDGQRSTGTPGAAGAPGPAGPAGQDGQPGSDGG 226
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASA-GSASTPRHPG 121
P H G+ + P RGPA A A G P +PG
Sbjct: 158 PGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPG 192
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPGG 118
P G+R+ P P+ P AG P H GG
Sbjct: 193 PGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGG 227
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 566 GDGGELVCSVGGRSTVVSRHVSRHTDGA 483
GD ELVCS G V ++ VS H++ A
Sbjct: 347 GDDVELVCSYHGEGHVTAKFVSGHSEFA 374
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 566 GDGGELVCSVGGRSTVVSRHVSRHTDGA 483
GD ELVCS G V ++ VS H++ A
Sbjct: 320 GDDVELVCSYHGEGHVTAKFVSGHSEFA 347
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 566 GDGGELVCSVGGRSTVVSRHVSRHTDGA 483
GD ELVCS G V ++ VS H++ A
Sbjct: 320 GDDVELVCSYHGEGHVTAKFVSGHSEFA 347
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 566 GDGGELVCSVGGRSTVVSRHVSRHTDGA 483
GD ELVCS G V ++ VS H++ A
Sbjct: 320 GDDVELVCSYHGEGHVTAKFVSGHSEFA 347
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.9 bits (59), Expect = 5.6
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -1
Query: 235 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 74
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 46 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 103
Query: 73 ASSERSVNKRTMSAESN 23
S ER N R SN
Sbjct: 104 YSRERDRNSRRDDRRSN 120
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.9 bits (59), Expect = 5.6
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -1
Query: 235 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 74
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 74 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 131
Query: 73 ASSERSVNKRTMSAESN 23
S ER N R SN
Sbjct: 132 YSRERDRNSRRDDRRSN 148
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.9 bits (59), Expect = 5.6
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -1
Query: 235 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 74
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 132 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 189
Query: 73 ASSERSVNKRTMSAESN 23
S ER N R SN
Sbjct: 190 YSRERDRNSRRDDRRSN 206
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.9 bits (59), Expect = 5.6
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -1
Query: 235 QARSPSSLWASRDQYSDSSSGAGVE-GVCRERLDPT----SSRW*PSLSNPY-RRPQEPA 74
++RSPS SRD+ D SS + R R P+ SS W S SN + RR + +
Sbjct: 133 RSRSPSRRRTSRDRRDDRSSRRRRDRSHSRSRSPPSSANGSSHW--SSSNRHSRRRRSRS 190
Query: 73 ASSERSVNKRTMSAESN 23
S ER N R SN
Sbjct: 191 YSRERDRNSRRDDRRSN 207
>U28741-2|AAA68326.2| 377|Caenorhabditis elegans Hypothetical
protein F35D2.2 protein.
Length = 377
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 367 NRDSSPVCPRRWPSSVRAAVSVATDMPSPRNM 272
+RD + PRRW SV+ V + M RNM
Sbjct: 275 HRDPALRIPRRWTRSVQEPVEIQKPMMRMRNM 306
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 27.5 bits (58), Expect = 7.4
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 376 SKDNRDSSPVCPRRWPSSVRAAVSVATDMPSPRNMTTFRAYPLLPSYQARSPSSLWASRD 197
S D DSS PR+ A A++ PSP N + P Y+ P+ +
Sbjct: 806 SSDESDSSYEAPRQQDPEPMEAFIEASEAPSPLNQES--EDPPAMHYELTGPNE---DVE 860
Query: 196 QYSDSSSGAGVE-GVCRERLD 137
D SSG+ + RERLD
Sbjct: 861 PAEDVSSGSHEDPTAARERLD 881
>Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical
protein R05A10.5 protein.
Length = 294
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 442 QAESATWASRQ*VLESPTVGKCSKDNRDSSPVCPRRWPSSVRAAVSVATDMPS 284
Q + W + L CS D D+S CP PS A S+ T +PS
Sbjct: 137 QRINGQWTRTRKCLSDKAGCPCSGDVTDASAQCPCSQPSD---ATSICTSVPS 186
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 123 RDDVGSRRSLQTPSTPAPELES---EYWSRDAQSELGERAWYDGSSGYARNVV 272
RD + + + P+ P P+ ++ ++W R G+ WY R VV
Sbjct: 18 RDALTNSTNGNKPNGPKPKFQTKICDHWRRSGSCSYGDACWYAHGEDDLRKVV 70
>Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical
protein F10D11.6 protein.
Length = 846
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHP 124
P+ + + + S P PA PA + GSA P+ P
Sbjct: 291 PSTNSQSSQSAPAPAALPAAPIAGGSAPAPQIP 323
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 222 PAHSGRRATSTPTPARGPALRASAGSASTPRHPG 121
P +G+R+T TP A P + GS P G
Sbjct: 193 PGQNGQRSTGTPGAAGAPGPQGPVGSDGQPGSAG 226
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)
Frame = +3
Query: 78 GSCGRRYGLDKDGY----HRDDVGSRRSLQTPSTPAPELESEYWSRDAQSELGERAWYDG 245
G+ G+R GL DD+G RR+ P+ P P R L R++
Sbjct: 870 GAIGQRVGLVPSNMVIEIASDDIGKRRTTTNPAPPPPTAPEPALRRQRWGSLKSRSYDYA 929
Query: 246 SSGYA 260
G A
Sbjct: 930 GEGRA 934
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,888,138
Number of Sequences: 27780
Number of extensions: 263305
Number of successful extensions: 1088
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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