Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14i11f
(629 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 40 2e-04
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 38 0.001
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 37 0.003
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 35 0.011
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 33 0.034
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.73
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 1.7
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 27 2.2
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 2.2
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 27 3.0
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 27 3.0
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 26 3.9
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 26 5.2
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 5.2
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 26 5.2
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 6.8
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 9.0
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 25 9.0
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 40.3 bits (90), Expect = 2e-04
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 385 FYYGYVLTHIPGGMLAERFG-GKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 561
FY G+V+ IPG ML +RF K+V STA+ T I + + L LR G
Sbjct: 133 FYVGFVIGQIPGHMLLQRFPVSKFVAA----STALWTIIIFLHCAAYNFSGLMALRFFLG 188
Query: 562 LGEGPTMPGLMAMLSKWAPKAE 627
L E +P + A + + P +E
Sbjct: 189 LVESSLLPTMEATIGMFFPHSE 210
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +1
Query: 376 LGSFYYGYVLTHIPGGMLAERFGGK-WVLGLGLLSTAICTFITPITVKMGGATALFILRV 552
L FY GY++ +P ++ + WV + L + + K G A + LR
Sbjct: 133 LALFYVGYIIFEVPSNLMMAFIEPRIWVSRIQLTIGVVGACHAVLGTKHGNAQSYVALRF 192
Query: 553 LEGLGEGPTMPGLMAMLSKW 612
G+ E PGL +S+W
Sbjct: 193 FLGVAESGLWPGLAYYMSRW 212
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +1
Query: 382 SFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 561
+FY GY++ P +L +RF L + L+ +T + G LRVL G
Sbjct: 108 AFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYPG----FIALRVLLG 163
Query: 562 LGEGPTMPGLMAMLSKWAPKAE 627
+ E PG + + ++W ++E
Sbjct: 164 MMESAASPGFILLTAQWYKRSE 185
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 34.7 bits (76), Expect = 0.011
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 370 LILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMGGATALFILR 549
+++ FY +VL P L +RFG +L +LS + GG A +R
Sbjct: 100 IMISIFYIPFVLCAFPFSYLYKRFGAARILPFFMLSFGAMSLCQAAVKNFGGMMA---VR 156
Query: 550 VLEGLGEGPTMPGLMAMLSKWAPKAE 627
G+ E +PG++ L+ + + E
Sbjct: 157 WFLGMAESAVLPGVVYYLTTFYRRTE 182
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 570
Score = 33.1 bits (72), Expect = 0.034
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 385 FYYGYVLTHIPGGMLAERFG-GKWVLGLGLLSTAICTFITPITVKMGGATALFILRVLEG 561
FY GY++ PG + + F GK+V GL S ++ F+ GG L LR G
Sbjct: 146 FYVGYIVGQFPGHYIMQTFPLGKFV-GLVTFSWSVIVFLHCCAYNYGG---LIALRFFLG 201
Query: 562 LGEGPTMPGLMAML 603
E +P + A +
Sbjct: 202 FTESCLLPAMEATM 215
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 28.7 bits (61), Expect = 0.73
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +1
Query: 343 FEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMG 522
+ S A QGL+ G G + I +A+RFG + + +G + I I +T +
Sbjct: 55 YSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSI-IGFCAVYIIGIIVQVTA-VP 112
Query: 523 GATALFILRVLEGLGEG 573
+ + ++ G+G G
Sbjct: 113 SWVQIMVAKIWTGIGIG 129
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 1.7
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Frame = -1
Query: 569 SPRPSNTRRMKRAVAPPILTVIGVINVQIAVDSKPNPRTHFPPNRSANIPPGICVS---- 402
S +P+ T M P V N AV PNP H S ++PP VS
Sbjct: 98 SSKPNQTTAMPPPSNNPSRHVSSTSNKPAAVS--PNPAAHHAELPSGSVPPSASVSRANS 155
Query: 401 ---T*P**KEPRINPCVASLHSNSTASS 327
T P NP A++H S A+S
Sbjct: 156 TATTTPHKAGVVSNPAAANVHVLSVAAS 183
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 27.1 bits (57), Expect = 2.2
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +1
Query: 343 FEWSEATQGLILGSFYYGYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITPITVKMG 522
+ +S A QGL++G G + + L +RFG + + +G I I +T +
Sbjct: 51 YSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCI-MGWTLVYITGVIVQLTT-IP 108
Query: 523 GATALFILRVLEGLGEG 573
+ + ++ GLG G
Sbjct: 109 SWVQMMVAKIWTGLGIG 125
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 220 KKNVAVEGDEHYDPNACPDLNIVANATSP 306
++ A+E D++Y+P+ P +ANA +P
Sbjct: 415 QRKAAIEEDDNYEPDENPLTETLANAHNP 443
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 575 GPSPRPSNTRRMKRAVAPPILTVIGVINVQIAVD 474
GP+ + SNT A+ PP T +G + I D
Sbjct: 125 GPTLKESNTTLRGEAILPPCKTPLGKVGSAICFD 158
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 70 FDKML--TGWKLALSKLFIIPQRYVLAVMGLLAIANAYTMRV 189
FDK + TG+++ S LF+I MGL I+ Y+ R+
Sbjct: 281 FDKHIDATGYEIEASSLFVIGNFLFFYEMGLFNISVIYSNRI 322
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 70 FDKML--TGWKLALSKLFIIPQRYVLAVMGLLAIANAYTMRV 189
FDK + TG+++ + LF+I + MGL I Y+ R+
Sbjct: 235 FDKHIDATGYEIEATSLFVIGNFFFFYEMGLFNIPVIYSNRI 276
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 259 PNACPDLNIVANATSP 306
PN CPD++++ N T P
Sbjct: 164 PNFCPDMSVLDNRTHP 179
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -3
Query: 612 PFR*HGHKTRHSWTFTETL*HSKNEKSSSATHFN 511
PF H H T HS TFT ++ S + +SSSATH N
Sbjct: 86 PFH-HPH-TIHSPTFTLSV--SPDSQSSSATHQN 115
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -1
Query: 572 PSPRPSNTRRMKRAVAPPILTVIGVIN 492
PSP+ N+++ + PP++T++G ++
Sbjct: 155 PSPKSLNSKKDSGPLRPPVVTLMGHVD 181
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 472 VNLI-PEPIFLRIVQLTFPQEYVLVRNHNKKNRESIPVSLRS 350
VN + P PI+ +V TFP+E + + + R PV + S
Sbjct: 217 VNAVAPGPIYTPLVSSTFPKEKIELSDQVPLGRMGQPVEVAS 258
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.0 bits (52), Expect = 9.0
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +1
Query: 394 GYVLTHIPGGMLAERFGGKWVLGLGLLSTAICTFITP---ITVKMGGATALFIL 546
GYV + L E+ G KW+ GL T + I T+ GG A F++
Sbjct: 391 GYVPGYWFTVFLVEKLGRKWIQLQGLFITGLMFAILAGSWDTISTGGRFACFVI 444
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.0 bits (52), Expect = 9.0
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 108 ETIHNPTALCVSGDGTIGNSECLHDACMPQLSYHSDGEEKR 230
E + N + SG + S CL D PQLS S E+KR
Sbjct: 494 EALLNNSPNSKSGSTQLSASTCLSDLISPQLSILSH-EDKR 533
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,714,354
Number of Sequences: 5004
Number of extensions: 57711
Number of successful extensions: 175
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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