Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14i05f
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    34   0.099
Z81122-13|CAB03356.3|  368|Caenorhabditis elegans Hypothetical p...    28   6.5  
AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine re...    27   8.6  
AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical...    27   8.6  

>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 388 DTDVNKFDFASAIKGVFMMLDLWQYEEGTWPGLTFIFDLQGIKMGLLS----KLDIQNIQ 555
           ++D+ +   A + +GV  ++   + E+G   G + IFDL G+ M  +     K+    + 
Sbjct: 139 NSDLYRMRIAES-EGVMQIIRKMEKEQGKPLGTSVIFDLDGLSMVQIDLAALKVVTTMLS 197

Query: 556 QFVAYFPDAILAKFNGLHFINTPTFM 633
           Q    FPD I   F     +NTPTF+
Sbjct: 198 QLQEMFPDVIRKIF----IVNTPTFI 219


>Z81122-13|CAB03356.3|  368|Caenorhabditis elegans Hypothetical
           protein T13F2.5 protein.
          Length = 368

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +1

Query: 139 TQPHLPKNLTDLDLILIYHKCDRSIQVSKQEIDNQYTLRTL 261
           TQ  LP++  D+ L  + ++   ++ +S   IDN Y L T+
Sbjct: 7   TQIVLPRSAADMILFSLINRTASNLDMSSDLIDNLYILETV 47


>AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine
           receptor, class t protein54 protein.
          Length = 387

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 371 FTLGFWTQMSTSLTSPALLRVSL*CWTY 454
           F L  WT  S   TSPAL   +  CW Y
Sbjct: 161 FCLFVWTIYSFLFTSPALFSSNHLCWLY 188


>AC090999-19|AAK26156.1|  575|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.16a protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 147 ASAEEPYRSRSDPDLPQMRPQHPSL 221
           AS + PYR R   DLP+  P + +L
Sbjct: 42  ASVDTPYRCRLPSDLPEKEPYYTTL 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,545,682
Number of Sequences: 27780
Number of extensions: 293785
Number of successful extensions: 838
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)