Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV14i05f
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   3.3  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   4.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    22   4.4  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   7.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 126 PMVGHSTASAEEPYRSRSDPDLPQMRPQHPSLQ 224
           P +     S  EP  +R    +PQ RP HP L+
Sbjct: 86  PRLRREAESEAEPGNNRP-VYIPQPRPPHPRLR 117



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   I +  P+
Sbjct: 50  IPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPR 82



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 78  IPQPRPPHPRLRREAESEAEPGNNRPVYIPQPR 110


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+   +    P N   + +  P+
Sbjct: 245 IPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPR 277



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 77  IPQPRPPHPRLRREAELEAEPGNNRPVYISQPR 109



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 133 IPQPRPPHPRLRREAELEAEPGNNRPVYISQPR 165



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 49  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 81



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 189 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 221



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 217 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 249


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+   +    P N   + +  P+
Sbjct: 133 IPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPR 165



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 21  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 53



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 49  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 81



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 77  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 109



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 105 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 137



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 161 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 193


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 103 ADDIAKLRQWLDTQPHLPKNLT 168
           A DI   + W D +  LP+N+T
Sbjct: 83  AADIFFAQTWKDNRLRLPENMT 104


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 50  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 82



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 78  IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 110



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 189 LPQMRPQHPSLQTGDR*SVYPKNVVYILLQGPK 287
           +PQ RP HP L+        P N   + +  P+
Sbjct: 106 IPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPR 138


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 109 DIAKLRQWLDTQPHLPKNLTD 171
           DI   + W D++  LP+N+++
Sbjct: 54  DIFLAQSWRDSRLRLPENMSE 74


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +3

Query: 114  CQATPMVGHSTASAEEPYRSRSDPDLPQMRPQHPSLQ 224
            C +  +V HS+   ++    +      Q +PQ  S Q
Sbjct: 1487 CDSKLIVDHSSQKTQQQQPQQQQQQQQQQQPQQQSQQ 1523


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,644
Number of Sequences: 438
Number of extensions: 3538
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)