Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV14h22f
(608 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 83 3e-17
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 75 1e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 73 4e-14
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 72 8e-14
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 71 1e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 67 2e-12
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 66 3e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 65 7e-12
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 55 9e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 50 2e-07
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 47 2e-06
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 45 8e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 39 7e-04
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 37 0.003
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 35 0.008
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 34 0.019
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 33 0.025
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 33 0.033
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 31 0.17
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.40
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 28 1.2
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 3.7
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 3.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 6.5
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 6.5
SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12 |Schiz... 25 6.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.7
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 25 8.7
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 25 8.7
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 25 8.7
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 83.0 bits (196), Expect = 3e-17
Identities = 36/77 (46%), Positives = 57/77 (74%)
Frame = +1
Query: 376 RREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLW 555
+++HL K++++GE G GKTSI+ +YV++ FS+ Y+ATIG DF K + D + ++ LQLW
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD-DKVVTLQLW 62
Query: 556 DIAGQERFGNMTRVYYK 606
D AGQERF ++ +Y+
Sbjct: 63 DTAGQERFQSLGVAFYR 79
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 74.5 bits (175), Expect = 1e-14
Identities = 30/75 (40%), Positives = 52/75 (69%)
Frame = +1
Query: 382 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 561
++L+K+L+IG+ G GK+ ++ R+ +++ Y +TIGVDF ++ + T ++LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKT-VKLQIWDT 64
Query: 562 AGQERFGNMTRVYYK 606
AGQERF +T YY+
Sbjct: 65 AGQERFRTITSSYYR 79
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 72.5 bits (170), Expect = 4e-14
Identities = 31/71 (43%), Positives = 51/71 (71%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++++G+ G GKT ++ ++V+Q FS+ Y+ATIG DF K + D + ++ LQLWD AGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVD-DKLVTLQLWDTAGQE 68
Query: 574 RFGNMTRVYYK 606
RF ++ +Y+
Sbjct: 69 RFQSLGMAFYR 79
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 71.7 bits (168), Expect = 8e-14
Identities = 32/72 (44%), Positives = 48/72 (66%)
Frame = +1
Query: 391 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 570
+K++ +GE GKTS+I R+++ F Y+ATIG+DF K + + T +RLQLWD AGQ
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 70
Query: 571 ERFGNMTRVYYK 606
ERF ++ Y +
Sbjct: 71 ERFRSLIPSYIR 82
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 71.3 bits (167), Expect = 1e-13
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +1
Query: 382 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 561
++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D I+LQ+WD
Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKR-IKLQIWDT 65
Query: 562 AGQERFGNMTRVYYK 606
AGQERF +T YY+
Sbjct: 66 AGQERFRTITTAYYR 80
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 66.9 bits (156), Expect = 2e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++++G+ GK+S++ R+V F + +TIG F + L D NT ++L++WD AGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 574 RFGNMTRVYYK 606
R+ ++ +YY+
Sbjct: 76 RYKSLAPMYYR 86
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 66.5 bits (155), Expect = 3e-12
Identities = 29/75 (38%), Positives = 51/75 (68%)
Frame = +1
Query: 382 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 561
++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D N I+ Q+WD
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLD-NKKIKAQIWDT 66
Query: 562 AGQERFGNMTRVYYK 606
AGQER+ +T YY+
Sbjct: 67 AGQERYRAITSAYYR 81
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 65.3 bits (152), Expect = 7e-12
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Frame = +1
Query: 373 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLN---WDSNTIIR 543
E ++L KI++ G GTGK+ +++R+V + T+G+DFA ++++ + I+
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 544 LQLWDIAGQERFGNMTRVYYK 606
LQ+WD AGQE+F ++ R YY+
Sbjct: 64 LQIWDTAGQEKFRSVARNYYR 84
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 54.8 bits (126), Expect = 9e-09
Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 391 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSN-TIIRLQLWDIAG 567
+K++++G+ GTGKT+ +KR++ F + Y AT+GV+ + L++ +N I +WD AG
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE--VHPLHFHTNFGEICFNVWDTAG 67
Query: 568 QERFGNMTRVYY 603
QE+ G + YY
Sbjct: 68 QEKLGGLRDGYY 79
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.4 bits (115), Expect = 2e-07
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K+ +IG+ GKTS++ YV F + T+GV+F K ++ NT I +WD+ GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTIS-IRNTEITFSIWDLGGQR 70
Query: 574 RFGNM 588
F NM
Sbjct: 71 EFVNM 75
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 376 RREHLY-KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQL 552
+++ +Y KI+++G+ GKTS++ + +F Q Y TI ++ + D N+I L L
Sbjct: 8 KKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFV-DGNSI-ELSL 65
Query: 553 WDIAGQERFGNMTRVYY 603
WD AGQE + + + Y
Sbjct: 66 WDTAGQEEYDQLRSLSY 82
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 45.2 bits (102), Expect = 8e-06
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++V+G+ G GKT ++ + F + Y T+ ++ + ++ +I L LWD AGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 574 RFGNMTRVYY 603
+ + + Y
Sbjct: 76 EYDRLRPLSY 85
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 38.7 bits (86), Expect = 7e-04
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++V+G+ GKTS++ + +F Y T+ ++ + D + ++L LWD AGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKS-VQLALWDTAGQE 67
Query: 574 RFGNMTRVYY 603
+ + + Y
Sbjct: 68 EYERLRPMSY 77
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 391 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 570
YK++V+G+ G GK+++ + + F Y TI D K D + L + D AGQ
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKKCEIDGEGAL-LDVLDTAGQ 66
Query: 571 ERFGNMTRVYYK 606
E + M Y +
Sbjct: 67 EEYSAMREQYMR 78
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 35.1 bits (77), Expect = 0.008
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K +V+G+ GKT ++ Y F Y T+ ++A+ V+ D L L+D AGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEP--YTLGLFDTAGQE 62
Query: 574 RFGNMTRVYY 603
+ + + Y
Sbjct: 63 DYDRLRPLSY 72
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 33.9 bits (74), Expect = 0.019
Identities = 20/76 (26%), Positives = 41/76 (53%)
Frame = +1
Query: 379 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWD 558
+E ++L++G GKT+I+K +++ ++ T G F ++ L + +R +WD
Sbjct: 13 KEREVRVLLLGLDNAGKTTILKCLLNEDVNE-VSPTFG--FQIRTLEVEG---LRFTIWD 66
Query: 559 IAGQERFGNMTRVYYK 606
I GQ+ N + Y++
Sbjct: 67 IGGQKTLRNFWKNYFE 82
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 33.5 bits (73), Expect = 0.025
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++++G+ GKT ++ + F + Y T+ ++ V D I L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHI-ELALWDTAGQE 65
Query: 574 RFGNMTRVYY 603
+ + + Y
Sbjct: 66 DYDRLRPLSY 75
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 33.1 bits (72), Expect = 0.033
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
K++++G+ GKT ++ + F + Y T+ ++ V D + L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHV-ELALWDTAGQE 65
Query: 574 RFGNMTRVYY 603
+ + + Y
Sbjct: 66 DYDRLRPLSY 75
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 30.7 bits (66), Expect = 0.17
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
+I V+G GK+S+ +YV F + Y TI F+ K + + ++ D AGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQE-FATEIIDTAGQD 65
Query: 574 RF 579
+
Sbjct: 66 EY 67
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRAT-IGVDFALKVLNWDSNTIIRLQLWDIAGQ 570
K+L++G G+GK+S+ + ++ R +D + + N + L LWD GQ
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV--LNLWDCGGQ 61
Query: 571 ERF 579
E F
Sbjct: 62 EAF 64
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 573
+IL++G GKT+I+ + +Q V F ++ + + + I+ +WD+ GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTYKN---IKFNVWDVGGQD 76
Query: 574 RFGNMTRVYY 603
+ + R Y+
Sbjct: 77 KIRPLWRHYF 86
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 398 SSSSANWVQGRLP*SNDMSTSSSVNTIEQPSA 493
SS ++N V+ LP SN S SSS + +P+A
Sbjct: 240 SSLNSNIVKPPLPPSNVQSNSSSSENVPKPNA 271
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 373 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 492
E +E+ ILV GE G GKT KR + + T+G
Sbjct: 159 ENKEN-QSILVTGESGAGKTENTKRIIQYLAAIASSTTVG 197
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 397 ILVIGELGTGKTSIIKRYVHQFFSQHYRATI-GVDFALKVLNWDSNTIIR 543
I+V+G G+GKT+ +++ S++ I +D A++ L +++N IR
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIR 60
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.4 bits (53), Expect = 6.5
Identities = 7/21 (33%), Positives = 17/21 (80%)
Frame = +1
Query: 397 ILVIGELGTGKTSIIKRYVHQ 459
+L++ E G+GKT+ + +++H+
Sbjct: 437 LLIVAETGSGKTTQLPQFLHE 457
>SPCC736.04c |gma12||alpha-1,2-galactosyltransferase Gma12
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 375
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 371 LNAGSIYIRSSSSANWV 421
+NAGS++IR+S W+
Sbjct: 249 INAGSLFIRNSEVGRWI 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 397 ILVIGELGTGKTSIIK 444
+L++GE GTGKT+ I+
Sbjct: 470 LLLVGETGTGKTTTIQ 485
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.0 bits (52), Expect = 8.7
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +1
Query: 397 ILVIGELGTGKTSIIKRYVHQ 459
++V+GE G+GKT+ + +++++
Sbjct: 511 LIVVGETGSGKTTQLAQFLYE 531
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.0 bits (52), Expect = 8.7
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = -1
Query: 428 FPVPNSPMTRILYKCSRRSALADACELPACCFCFGDIILGHNVKKHKNKSDQTISMKYLI 249
FPV P+ C L A ++ F DI+L H ++KH S K ++
Sbjct: 73 FPVNEIPLLECATAC-----LVVASKIEDTAKKFRDILLAHYLQKHPGSEVDAHSQKRIL 127
Query: 248 EFSR*NLN--TSHFKLEDPYS 192
R L F++ P++
Sbjct: 128 GLERMTLELICFDFRVRHPHN 148
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 394 KILVIGELGTGKTSIIKRYVHQ 459
KIL+ G+L GK+++ VH+
Sbjct: 156 KILITGDLNAGKSTLCNALVHK 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,453,355
Number of Sequences: 5004
Number of extensions: 49440
Number of successful extensions: 194
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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